KEGG   Brassica napus (rape): 106361137
Entry
106361137         CDS       T04128                                 
Name
(RefSeq) serine hydroxymethyltransferase 3, chloroplastic
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
bna  Brassica napus (rape)
Pathway
bna00260  Glycine, serine and threonine metabolism
bna00460  Cyanoamino acid metabolism
bna00630  Glyoxylate and dicarboxylate metabolism
bna00670  One carbon pool by folate
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
bna01200  Carbon metabolism
bna01230  Biosynthesis of amino acids
bna01240  Biosynthesis of cofactors
bna04981  Folate transport and metabolism
Module
bna_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    106361137
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    106361137
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    106361137
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    106361137
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    106361137
Enzymes [BR:bna01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     106361137
SSDB
Motif
Pfam: SHMT Beta_elim_lyase DUF6325
Other DBs
NCBI-GeneID: 106361137
NCBI-ProteinID: XP_048594848
LinkDB
Position
A8:14160554..14163709
AA seq 529 aa
MQACCGGTSMGSLQQPVRVQRPVFAPITSPVTKFSQQLKFSFPRPCPSLFLRKSSVFERR
ASSVSAPDVETTSNEIPFEDYSRREVDPEVDDIITKEKNRQFRSLELIASENFTSRAVME
TVGSCLTNKYSEGLPGKRYYGGNEFIDQLETLCQNRALATFRLDSTKWGVNVQPLSGSPA
NFAVYTAILKPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDY
DMLEKTAVLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVAD
PFEYCDIVTTTTHKSLRGPRGGMIFFKKDPVNGVELESAINNAVFPGLQGGPHNHTIGGL
AVCLKHAQSPEFKAYQKRVVANCRSLANRLVELGFKLVSGGSDNHLVLVDLRPLGMDGAR
VEKILDMASITLNKNSVPGDKSALVPGGIRIGTPAMTTRGLSEKDFVVVADLIKEGVEIT
MEAKKLVSGTKLGEFTKFVTSAEFPLRERVESLKDRVESFTSRFPIPGV
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgcaagcttgttgtggaggtacttcaatggggtctcttcagcaacctgtacgggttcaa
agacctgtctttgctccaataacctccccagtgactaaattctcccagcaactcaagttc
agtttcccgagaccttgcccttctttgtttctgagaaaaagctcggtctttgaaaggaga
gcgtcttcagtctcagcacctgatgtggagactaccagcaatgagatcccattcgaggac
tacagtcgtcgtgaagtggatccagaggtcgatgatatcatcaccaaggagaaaaacaga
cagtttaggagcttggagcttattgcatccgagaatttcacttctcgagctgttatggag
actgttggatcatgccttaccaacaagtactccgagggtcttcctggtaaaaggtattat
ggtggcaatgagtttatagatcagttggagacactttgccagaaccgtgctttagcaacc
ttccggttagattctactaagtggggtgttaatgttcagccgttgtctggttcacctgca
aactttgctgtctacaccgccatacttaagcctcatgatcgtatcatgggtttggattta
cctcatggtggacatctatcacatgggttcatgactgccaaaagacgtgtatctggaact
tcaatatactttgagtccatgccttatcgacttgatgaatcaacagggattgtggattat
gatatgctcgagaagactgctgtactgttccggccaaagcttataattgcaggagctagt
gcatatagccgagattttgactatcctcgcatgaggaagatcgcagactcagttggtgct
ttcctgatgatggatatggctcacatcagtgggcttgtggctgcttctgtggtagccgat
ccttttgagtattgtgatattgttacaacaaccactcacaagtctttgagaggtccgaga
ggtggcatgatcttcttcaagaaggatccagttaacggggttgaacttgaatctgccatt
aacaatgctgtcttccctggtttgcagggtggccctcataaccacacaattggaggatta
gcagtgtgcttgaaacatgcacagtcgccggagttcaaggcttaccagaaaagagttgtg
gctaactgtaggtctctagctaaccgattggttgagctcgggtttaagctagtctctggt
ggcagcgataaccacttggttcttgttgatcttagaccattgggaatggatggtgcacgg
gttgagaaaatcttagacatggcatctattacactcaacaagaactctgtccctggggac
aagagtgcattggttccagggggaataaggataggaacgcctgcaatgacgacaagagga
ctgtcagagaaagactttgtggtggttgctgacttgatcaaggaaggtgtagagataacg
atggaagccaagaagttggtgtcggggacaaagcttggagagttcaccaagtttgtgaca
tctgcagagttcccattgagagagagagtggagagtctcaaggatagagtggaatccttc
acctctcgtttccccattcctggagtttga

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