Brassica napus (rape): 106361200
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Entry
106361200 CDS
T04128
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY1-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106361200
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106361200
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106361200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_16
zf-ANAPC11
DUF2921
zf_RING_Vps8_fungal
zf-RING_UBOX
zf_RING_Vps8
Prok-RING_4
zf-RING_Vps41
PHD_NSD
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
106361200
NCBI-ProteinID:
XP_013656371
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All DBs
Position
A8:complement(15278139..15282246)
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AA seq
565 aa
AA seq
DB search
MKKRQHLGVLGLGFVEFQIIFLLSIWLAFPQQAAGLRPIREKARTWSDEWLFGRKQVSEG
GRFSAWNITGTYRGNWKFLDSLNSSSKFQDFQKSNGNSVVELVAVPTKITGVHYVQGVVL
FHDVFDNEQNLGGAQISLEGVYIWPFRQLRLVANSGKESDAGQDENNLLSNPYHLLGIFS
SQVFQESTRDRILQRKISPRNEMDKHCNIEIAAQISRVASSDNNGDKSYYHMEGLMESPG
VGDDGDCFSPLFLNATSVNVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHGNTQSGAAK
VSIVMIGHQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKAT
RPSISGEGWETMRRELSFLYSRFYGILLGGILIMYELHNYMRPILLLMYSFWIPQIVTNV
IRDSRKPLHPYYIVGMTATRLAIPLYVFGCPHNFMRIVPSKAWCVCLCTFMGLQAVILLL
QHYFGSRCFVPRQMLPEKYNYHRRFNQDISRNTDCVICMTAINLRQRTSDFMVTPCEHFF
HTGCLQRWMDIKMECPTCRRSLPPA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgtcaacatttgggggttttgggattagggttcgtcgaatttcagatcatc
ttcttgttatcgatttggttggcgtttccgcagcaagcggcggggcttagacccattagg
gagaaagctcgaacatggagcgacgagtggctctttggtagaaaacaagtatctgaagga
ggaaggttttccgcatggaacataacaggaacatatagagggaattggaagtttctggat
tccttaaatagctcttcgaagttccaagacttccagaaatcaaatggtaattctgtggtt
gagttagtggctgttccaacaaagataaccggtgtgcactatgttcagggtgtggtttta
ttccatgacgtatttgacaatgaacaaaatttgggtggtgcccaaataagtctggaagga
gtatatatatggccctttagacaactccgccttgtggctaacagtggcaaggagagtgat
gcagggcaagacgagaataatcttctctcaaatccctatcatctgcttggaatcttttcc
tcgcaagtgtttcaagaatctacaagagacagaatactgcaacggaagatttcgccgaga
aatgagatggataagcactgtaacatcgaaatagcagctcagatatcccgtgtggcttct
agtgacaacaatggagacaaaagttattatcacatggaaggattgatggaaagtcctggg
gtaggcgatgacggagattgtttctcgcctttgttcctgaatgcaacttctgtgaatgtc
gaggtctactacaacaaagctgtgaactatacactgatggtcacttttgtctctttcctc
caggttcttttgttgatccgtcaaatggagcacggtaacacacaatctggtgctgccaag
gtatccattgtaatgatcggacatcaagcaatcatggatgcttacttatgccttttacat
ctcactgctgggatattagttgaatctctatttaatgcatttgcaaccgccgcgttcttc
aaattcgtagtcttttcgattttcgagatgagatatcttctggctatatggaaagcaacc
aggccttcaatcagcggagaaggctgggagacaatgaggcgtgaactctcctttctctac
agccgtttctatgggattctacttggagggatattgataatgtacgagctccacaactac
atgcggccgattcttcttctcatgtactcattttggataccacagatagtcaccaacgtc
atccgggattcaagaaagcccctgcacccgtattacatcgtgggcatgactgccacacgg
ttagctataccgttgtatgtttttggatgcccacacaacttcatgcgtatagtgcctagc
aaggcctggtgcgtgtgcttgtgcacgttcatggggttgcaagctgtcattcttcttctt
cagcattactttggttcacgttgctttgttccccgccagatgctaccagagaaatacaac
taccacagaagatttaatcaggacataagccgcaacactgattgcgtcatctgcatgacc
gctatcaatctcagacagcgtaccagtgatttcatggtaactccatgtgaacatttcttc
cacacgggatgcttacagaggtggatggatataaaaatggagtgcccgacttgtcggcgt
tcccttcctccagcttag
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