Brassica napus (rape): 106361284
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Entry
106361284 CDS
T04128
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106361284
03460 Fanconi anemia pathway
106361284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106361284
03400 DNA repair and recombination proteins [BR:
bna03400
]
106361284
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106361284
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
106361284
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
106361284
Bloom's syndrome complex (BTR)
106361284
FA (Fanconi anemia) pathway
106361284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
106361284
NCBI-ProteinID:
XP_013656465
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All DBs
Position
A8:complement(16104049..16108271)
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AA seq
705 aa
AA seq
DB search
MKKSPLPVQNVNRSDKNVAGKEALVKLLRWHFGHGDFRGKQLEAIQAVVSGRDCFCLMPT
GGGKSICYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVRNKIHE
DLDSGKPSVRLLYVTPELIATKGFMLKLRKLHDRGLLNLIAIDEAHCISSWGHDFRPSYR
QLSTLRDSLTDVPVLALTATAAPKVQKDVIDSLSLRNPLVLKSSFNRPNIFYEVRYKDLI
DNAYTDLCNMLKSCGKICAIIYCLERTTCDDLSLHLTSTGISSAAYHAGLNSHLRSTVLD
DWLSSKKQVIVATVAFGMGIDKKDVRMVCHFNVPKSMESFYQESGRAGRDQLPSRSVLYY
GVDDRKKMEFLLRNSENKKSPSSSSKKPTSDFEQIVRYCEGSGCRRKKILESFGEEFPVQ
QCKKTCDACKHPNQVARSLEELTTTASRRHNSSRVFITSSSDNKTNEGQYSEFWNRNEDG
SNSDEEISDSDDGADVVKSLAGPKLSRKLGVDEKLVLLERAEEKYNESNKQVKKSEKNAI
SETLRESSKQRLLNELTKVLQLLGVKEIDSQNASEFLENECYRKYSKAGKSFYYSQIAST
VRWLGTASRDELMTRLSSMAREEETSGEPILVTEPSQNIEQEDGTTYTAEPQVDEPTQLL
VTSPSRSPISLPEIPSFSEFVNRRKMKHSTDGSDGKKPAKIMKLK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcgccgttgccggtgcagaacgttaaccgctccgataagaacgtcgccgga
aaagaagcactggtgaagctattgcgatggcacttcggccatggagacttcagagggaag
cagctagaggcgattcaagcggttgtatcaggaagggattgcttttgcttgatgccgacg
ggaggagggaaatcgatttgttatcagatacctgcgttggctaaacctggaatcgtgctt
gttgtttctcctttgattgctttgatggagaaccaagtgatggcgttgaaggagaaaggt
attgctgctgagtatctctcgtccactcaagctacacatgttaggaacaagatccacgag
gaccttgattctggaaaaccttctgtaagattgctgtatgtaactccagaactgatcgcg
acaaaaggatttatgctgaagctgagaaagctccatgacaggggtttactgaatcttata
gccatagacgaggcacattgcatctcatcatggggccatgacttcagacctagctatcgt
caactttcaaccttaagagattctttgactgatgttccagtgttggctctaaccgctact
gctgctcctaaggtacaaaaggatgtcattgactccttgagtttgcggaatcctttggtc
ctcaagtcctctttcaatcgcccaaatatcttctatgaagttaggtacaaagaccttata
gacaatgcttatactgatttgtgcaacatgctcaagtcatgtggaaaaatatgtgcaatt
atctattgccttgagcgtacaacctgtgatgacttgtctcttcatctcaccagtactggg
atctcttctgctgcttatcatgcaggactcaatagtcatctgagaagtactgttttagat
gactggctgtcctcgaagaagcaagttattgttgccacagtggctttcggaatgggtata
gataagaaggatgtgagaatggtttgccactttaacgtcccaaaatcgatggaatctttc
taccaagagtccggtagagcaggtcgggatcagctaccttcaagaagtgtattatactat
ggcgtagacgatagaaagaaaatggagtttctactacggaactcggagaataagaaatcc
ccatcctcatcctcaaagaagcctacatctgacttcgagcagattgtgagatactgcgaa
ggttctggatgccgaaggaaaaagattcttgagagctttggtgaagagtttcctgtacag
caatgcaagaaaacgtgtgatgcatgtaagcatccaaatcaagttgctcgtagcttggag
gagctcacgactaccgcctcccgaagacacaactcttctcgagttttcatcaccagctcg
agtgataataagaccaatgaagggcagtactctgagttctggaatcgtaatgaagatgga
agcaattccgacgaggaaatatcagattcagatgatggagctgatgttgtcaaaagccta
gcaggacctaaactatcgaggaagctgggagtagatgagaaactggttttactggagcgg
gctgaggaaaagtacaacgaaagcaataaacaggtcaaaaagtcagagaagaatgcaata
tctgaaacactaagggaatcaagcaaacagagactcttgaatgagcttacaaaagtactt
caactgctcggtgtaaaagagattgattcccaaaacgcatctgagtttcttgaaaacgag
tgctatagaaaatacagcaaagcagggaaatcgttttactactcacagatagcgagtact
gtgagatggttaggaaccgcaagcagagacgagctaatgacccgacttagctcaatggcc
agagaagaagagacatcaggagaaccaatcctggtgactgaaccatcacagaacatagag
caagaagatggaaccacatacacagccgagccacaggtcgatgaaccaacacagctgctt
gtgactagcccgagccgttcgcctataagtctcccggagattccgtcattctcagaattt
gtgaaccgtagaaagatgaagcactctaccgacggttctgatggcaagaaaccggcaaag
ataatgaagctaaagtaa
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