KEGG   Brassica napus (rape): 106361290
Entry
106361290         CDS       T04128                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a isoform X1
  KO
K12897  transformer-2 protein
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106361290
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bna01009]
    106361290
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106361290
Protein phosphatases and associated proteins [BR:bna01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106361290
Spliceosome [BR:bna03041]
 Common components
  Common spliceosomal components
   SR proteins
    106361290
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded
Other DBs
NCBI-GeneID: 106361290
NCBI-ProteinID: XP_048593769
LinkDB
Position
A8:16064055..16066183
AA seq 241 aa
MADSPNEERDSRSPPPPRKEQPRSRSRSRSRSMPRDRSRSRSLPRHVSPSRTRGRSRSRS
RGRSEIENPGTTLYVTGLSTRVTEKDLEAYFSKEGKVASCVLVLEPRTRESRGFAFVTMD
SVKDAERCIKYLNHSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDNDRDSRSSRGRH
YDRDDSGHRRSPPRRDLSPRDHGRRSPRDHGRSSRRDRSYSPRGRSPERRSERRYQPRGS
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcggattctcccaacgaagaaagggactcacgatctcctcctccaccccgaaaagaa
caaccaagatctaggtctaggtccaggtccaggtccatgccgagagataggtctaggtca
agatctttaccaaggcatgtatctccatcaagaacccgtggaaggtcgaggtcaagaagc
cgtggaaggtctgaaattgaaaaccctggtaccactctctatgtgaccggcttatcaaca
agagtcacagaaaaggatcttgaagcttatttctccaaggaaggaaaggttgcgtcctgc
gttctagtgctggagccgcgcacccgcgagtctcgtggttttgcctttgtcacgatggat
agtgttaaggacgctgagcggtgcattaagtatctcaaccattctgtactagaaggccga
tacataactgtcgaaaggtcccgaagaaagcgcccgagaactcccaccccaggccactat
cttggcttaaaaagctccagagacaatgaccgagatagccgtagcagtcgagggaggcac
tacgatcgtgatgattctggacaccgtaggtcaccaccaagacgcgacttatcacctcgt
gatcatggaaggaggtcacctcgtgatcatggaagaagctctagaagagatcggtcttac
tctcctcgtggaagaagcccagagagaaggtccgagagaaggtatcaacctcgtggctcg
agatga

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