Brassica napus (rape): 106361417
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Entry
106361417 CDS
T04128
Name
(RefSeq) transcription factor SPATULA-like isoform X2
KO
K28361
transcription factor SPT/ALC
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106361417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106361417
Transcription factors [BR:
bna03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106361417
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
106361417
NCBI-ProteinID:
XP_013656610
UniProt:
A0A078I4L0
A0ABQ8CF82
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All DBs
Position
A8:complement(16498248..16502018)
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AA seq
341 aa
AA seq
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MADKKLISSSSSSTTSIYDTRSSNNSNHHNPPSSSDEISLFLRHIFDRSSPLPSYYSPAT
MTTVVHGDPHAENPRRFVSPQTSKVLVGSGVGSSSATACYGFSRVGGGNNNIAQGNSSGT
RVSSSAVGASGNETDEYDCESEEGVEVVFDDELLCKSRTSSKRCRAAEVHNLSEKKRRSR
INEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGVNLHPLCLPGTTLH
PLQLSQLLPVVPPEATNDSLFNHTNHFASTSNAPAMINTDALEPSIRSHFGPFPLLTSPA
EMSGEGVLTHSRLNVGHSNTNLTGRQAALNGQQPDLKDRLS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagaaattgatttcatcttcttcttcttcaactacatcgatttacgatact
cgtagtagtaataatagtaatcatcataatccaccgtcttcttccgacgagatttctctg
tttctccggcatattttcgaccgttcttctcctttaccttcctactattctccggcgacg
atgactacggtggttcacggtgacccacatgcagaaaacccgagacgtttcgtttctccc
caaacgtcgaaggttttagtcggctccggcgttggatcaagctccgccaccgcgtgttat
ggtttctccagggttggtggtggtaataataacattgcgcaaggaaacagctcagggact
cgtgtttcgtcttcggcagttggagctagcgggaacgagaccgacgagtatgactgtgaa
agcgaggaaggagtagaagttgtgtttgacgatgaacttctctgcaagtctcgtacctca
tcaaagagatgcagagctgctgaagttcataacttgtctgaaaagaaaagaagaagtagg
atcaatgaaaagatgaaagctttacaaagtctcatccctaattcaaataagacggataag
gcttcaatgcttgatgaagccatagagtatctgaaacagcttcagctccaagttcagatg
ttgacaatgaggaatggggtaaacttacatcctctgtgcttacctggaactacattacac
ccattgcaactctctcagctcctacctgtggttcctccagaagcaaccaatgattctctg
tttaatcacaccaatcattttgcttccacttctaatgcaccggcaatgatcaacacagac
gcgttggaaccttccattcgcagtcactttggacctttccctctccttacttcacctgcg
gagatgagtggtgaaggagtgttaactcattcacggttaaacgttggtcattccaataca
aacttaaccgggagacaagctgcgcttaatggtcaacaacctgacctaaaagatcgactt
agttga
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