Brassica napus (rape): 106361540 Help Entry 106361540         CDS       T04128                                  Name (RefSeq) E3 ubiquitin-protein ligase UPL3   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism bna  Brassica napus (rape) Pathway bna04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:bna00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     106361540  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:bna04121]     106361540 Enzymes [BR:bna01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      106361540 Ubiquitin system [BR:bna04121]  Ubiquitin ligases (E3)   HECT type E3    106361540 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HECT TPR_TRIP12_N ARM_ARMC5 HEAT_EZ HEAT_GCN1 K_channel_TID Ltn1_1st Motif Other DBs NCBI-GeneID:  106361540 NCBI-ProteinID:  XP_048593846 LinkDB All DBs Position A8:17359691..17368050 Genome browser AA seq 1888 aa AA seqDB search METRSRKRAEATSTAPSSSSSSPPPPPSSGPTTRSKRARLSSPSSSSAAATAPSSSTRSR SSRSTTATVAVTPMDTSTESSGFHRGGGRGNRGNDNTNSDKGKEKEHEVRIRDRERDRAR QQLNMDAAAAAAAAADEDDDNDSEDGNGGFMHPNMSSASSALQGLLRKLGAGLDDLLPSS GIGSGSSSHLNGRMKKVLAGLRSEGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPV LVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAEQS LQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVAVSTAANMCKKLPSDASDYVME AVPVLTNLLQYHDAKVLEYASICLTRIAEAFASSPDKLDELCNHGLVTQAATLISASNSG GGQASLGVSTYTGLIRLLSTCASGSPLGCRTLLLLGISSILKDILSGSGVSANASISPAL SRPADQIFEIVNLANELLPPLPEGSISLPTSANALVKGSGQKKSSPSTSGKQEDSPKVSP REKLLSDQPELLQQFGLDLLPVLVQIYGSSVNGTIRHKCLSVIAKLMYFSTPEMIQSLIG DTNISSFLASVLAWKDPQVLVPALQVAEILMEKLPETFSKVFVREGVVHAVDQLVLVGKP SSHASTDQENDCVPGSARSRRYRRRSSNANSDGNQSEELKNSVSASIGANHNSMESPTAS FMLRETVSSCAKAFKDKHFPSDGGEFDVGVTDDLLHLKNLCTKLTAGTNDHKVKGKGKSK ASGPCLGDFSASKEEYLIGIISEILGELSKGDGVSTFEFIGSGVVAALLNYFSYGYFSKE KISEVDLPKLRQDGLRRFTAFLEIALPSDGNEGKIPPMTVLIQKLQDALSSLERFPVVLS HPSKSLSGSARLSSGLSALAHPLKLRLCRAPGEKALRDYSSNIVLIDPLASIAAVEEFLW PRVQRSESGVKPAAPVGNTEPGTLPSGAGVSSPSSSTPASTTRHSSRSRSAIKIGDASKK EPVHEKGTSSSKGKGVMKPAQPDKGPQTRSSAQRKAVLDKDTLMKPASGDSSSEDEEMDI SPVDMDDALVIEEEDISDDDEDDDDEDVLDDNLPMCTPDKVHDVKLGDAVDDEGAGLAPS GRQMNSALAGSSGTATARGSNSTDAGIGNLYGSRGALSFAAAAMAGLGAASGRGIRGSRD LHGRTLNRSSDESSKLMFTAGGKQLSRHMTIYQAVQRQLMLDEDDDDRLGGSDFISSDGS RLNDIYTIMYQMPDSQANRLSAGGASSTTPSKSTKSATTNASVEAQSYRASLLDSIVQGK LPCDLEKSNSTYNVLALLRVLEGLNQLGPRLRAQTVSDRFAEGKITSLDDLNTTAAKVSH EEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTTACPFLFPFQTRRQYFYSTAFGLSR ALNRLQQQQGADGSGSTNEREMRIGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVE YFGEVGTGLGPTLEFYTLLSHDLQKVSLGMWRSNSGDKLSMQTDRDEIQDGKSAAARDRD IVQAPLGLFPRPWPSTADVSEGSRFHKVVEYFRLLGRVMAKALQDGRLMDVPLSTAFYKL ILGQELDLHDVILFDAELGKTLQELRVLVGRKHYLEAGGGDNSSGISDLCLRGSRIEDLC LDFTLPGYPEYILRPGDDIVDINSLEDYISLVVDATVKRGVARQIEAFRSGFNQVFDIKS LQIFTPSELDYLLCGRRELWEAETLVEHIKFDHGYTAKSPAIIFLLEIMGELTADQQRAF CQFVTGAPRLPPGGLAVLNPRLTIVRKLSSTSNAAANGTGASETADDDLPSVMTCANYLK LPPYSTKEIMYKKLLYAINEGQGSFDLS NT seq 5667 nt NT seq  +upstreamnt  +downstreamnt atggaaactcggagccgcaagcgtgcggaggcgacctcaactgccccatcttcttcttct tcctctcctcctcctcctccttcctcaggtcccaccactcgcagcaaacgcgctcgcctc tcgtctccctcttcatcttcagccgccgctactgcaccttcctcctccacccgctctcgt tcttctcgctctaccaccgctacagtcgccgttactcccatggacacatccaccgagtct tctggattccaccgcggcggaggacgaggtaacaggggaaacgataatactaactctgat aagggaaaagagaaggagcatgaggttaggattagggatagagaaagagacagagctagg caacagctcaacatggacgctgcagctgctgctgccgccgccgctgacgaggacgacgac aatgatagtgaggatggcaacgggggattcatgcatcccaacatgagctcagccagcagt gcgttacaagggttgctgaggaagcttggagctggacttgatgacttgcttccttcttca ggtattggctcaggttcgtcttctcacttgaatgggaggatgaagaaggtactcgctggc ttgcgctctgaaggagaagagggaaagcaggtcgaggctttgacgcagctgtgcgagatg ttatctattgggaccgaagactccctgagcaccttctctgttgattccttcgtcccggtt cttgttggtctacttaaccatgagagcaatccggatattatgcttcttgctgccagggct cttactcatctgtgtgatgttttgccgtcttcttgtgctgctgttgttcattacggggct gtttcgtgctttgtcgccagattgttgacaatagaatacatggacttggccgagcagtct ctgcaagctctcaaaaagatatctcaggaacacccaacggcctgtttgcgtgctggtgct cttatggcagtgctatcatatctggatttcttctccaccggtgtccagcgtgtagcagta tctaccgctgcaaatatgtgcaagaagttaccttctgatgcatctgattatgttatggaa gctgtaccggtactgacaaacctacttcagtatcatgatgcgaaggttttggaatatgct tctatctgtttgactcggattgccgaagcatttgcatcgtcccctgataaattagatgaa ttatgcaaccatggcctggtgactcaagctgcgactcttatatccgctagcaactcggga ggtgggcaagcatctctcggtgtttcaacatacacgggattaatccgattactttccacc tgtgcgagcggttcacctcttgggtgcaggacattacttcttctcggtattagtagcatt cttaaggatattctgtcgggttccggtgtctctgctaatgcatctatatccccagcactg agcaggcctgcagatcagatttttgagatagtcaacctagcgaacgagctcctccctcca ctgccagaaggaagtatctcccttcctactagcgcaaacgcgttagtgaaaggttcaggc caaaaaaagtcttctccaagtacttcaggaaaacaagaagattctcccaaagtttcacct agagaaaaattacttagtgatcaacccgaacttctgcagcaatttggattggatcttctt ccagttttagtgcagatctatggttctagtgtcaatggtactattcgtcataaatgtctc tcagttatcgcaaagttgatgtatttcagcactccagaaatgattcaatctctaattggt gacacaaatatatcgagcttcttggctagtgtcttggcatggaaagatccacaagtcttg gttcctgctctacaagttgcagaaattctgatggaaaaacttcctgaaactttctcgaaa gtgtttgtgagggaaggggtggttcatgctgtagatcaacttgtcttggttggtaaacct agttctcatgcttctactgatcaggaaaatgactgtgtgcctggatctgcacgatctagg cgttatagacggcgaagtagtaacgccaattctgatggaaatcagtcggaagagcttaag aattctgtgtcagctagtataggtgcaaaccataattccatggaatctcctacagcgagc ttcatgctaagggaaacagttagctcctgtgcaaaagcattcaaagacaagcacttcccg tctgatggtggggaatttgatgttggagttacagatgatctcttgcatctgaagaatctt tgcacgaagctaactgctggtacaaatgatcataaagtgaaaggaaaggggaaatctaaa gcctctgggccatgcctcggcgatttttctgctagcaaagaagaatacttgattggtatc atctccgagatacttggcgagctaagcaaaggagatggtgtctcaacttttgagtttatt ggcagtggtgtggtagcagcattgcttaactatttttcttatggatacttttccaaagag aagatctccgaggttgatttgcccaaacttcgccaggatgggctcagaaggttcacagct tttctagaaattgcacttccttctgatggtaatgagggaaagatccctcctatgactgtt ttgattcagaaacttcaagatgctttgtcttcactggaacgctttccggtcgtccttagc catccctcaaagtcactcagtggaagtgctcgtctctcatctggattgagtgctttggca catcctttgaagttgcggttatgccgtgcacctggagagaaggcactacgtgattactcc tccaatattgttctcatagatcctttggcaagcatagcagcagtggaggaatttctctgg ccccgagttcaacgcagtgaatctggggtgaagccagcagcgcctgttggaaacactgag ccaggcacattacctagcggtgctggtgtttcatcaccatcctcgtcaactccagcttcc accactcgtcattcttctagatctagatctgcaattaaaataggcgatgcctcaaagaaa gaacctgtgcacgagaaaggtaccagctcatctaaaggtaaaggtgttatgaagccggct cagccggataaggggcctcagacaaggagcagtgctcaaaggaaagctgttcttgacaaa gatacactaatgaaaccagctagcggagactccagctctgaggacgaagaaatggatata tcccccgtcgacatggatgatgctttggttattgaagaggaagacatttctgacgacgat gaggatgatgatgatgaggatgtcttggatgacaatcttcccatgtgcacccctgataag gttcatgatgtaaaattgggagacgcagtggatgatgagggagccggtctagcacctagc ggccgacagatgaattcagctttggcaggaagtagtggaacagcaactgcaaggggatct aattctactgatgctggcattgggaatctttatggttctaggggtgcactctccttcgct gctgcggcgatggcagggcttggagctgccagtggtagaggtatcaggggaagtagagac ctacatgggcgtaccctgaatcgaagttctgatgagtcctctaagttgatgtttactgcg ggaggaaagcaacttagtaggcatatgacgatatatcaggctgtgcaacgacaacttatg ctagacgaagatgatgatgacaggctcggtggcagcgatttcatctccagtgatggaagc agattaaatgatatatatactatcatgtaccagatgccggacagccaagcgaataggttg tctgctggtggtgcaagttctaccacaccatctaaatccaccaaatctgctactactaat gcaagcgtagaagctcagtcgtatagggcatctcttttggatagtatcgtacaaggaaag cttccatgcgaccttgagaagtccaattctacgtataatgttctggcgttgttacgtgta ttagagggtttaaatcagcttggccctcgcttaagagcccaaaccgtttctgatcgtttt gcagagggtaaaattacaagtctggatgatctgaatacaactgctgcaaaggtttctcat gaagaattcatcaacagcaaacttacacccaaattagctcgacagatccaggacgcgctt gctttgtgcagtggaagtcttccctcttggtgctaccagttgactacagcatgcccgttt ttgtttccgtttcagacccggagacagtatttctattcaactgcctttgggttgtcgcgt gcattgaaccgcttgcagcagcagcaaggtgctgacggcagtggttctacaaatgaacga gagatgagaatagggagattgcagcgccagaaagtgcgtgtatcccgaaatagaatatta gattctgctgcgaaagttatggagatgtattctagccaaaaagctgtgcttgaagtagaa tattttggtgaagttggtactggtctaggcccgacacttgagttttacacactcctaagc catgatttgcaaaaggtttcccttgggatgtggagatcaaattctggtgacaagttatct atgcaaactgatagagatgagattcaagacggtaaatcagcagcagctagggacagagat atagttcaggcaccacttgggttgttccctcggccctggccctcaactgctgacgtatct gaaggtagtcggtttcataaagttgttgaatatttccgccttttagggcgcgtgatggca aaggcacttcaagatggacggctaatggacgtcccgttaagtacagctttttataagctc attcttggtcaagagcttgatttgcatgatgttatattatttgatgctgaacttggcaag actttgcaagagcttcgtgttcttgttggccgtaagcactatctggaagcaggcggtggt gacaacagtagcgggatttctgatttatgtttgcgtggatcccgtattgaagatctttgc ttggacttcaccctacctggctaccctgaatacatattgagaccaggagatgacattgtt gatattaatagtcttgaggactatatatccctggtcgttgatgccactgtcaagagagga gttgcccggcagattgaagccttcagatctggattcaatcaggtctttgacataaaatct ctacaaatattcaccccttctgagctggactacttgttgtgtggtcgtagagagttgtgg gaggcggagactcttgttgaacatatcaagtttgatcacggttatactgcaaaaagtccg gcaatcattttcttattggagatcatgggagagctaacagcagatcaacagcgggctttc tgccagttcgtaactggagctcctaggcttcctcctggtggcttagctgttctcaaccca aggctgacgattgtgagaaagctctcatcaacctcaaatgctgctgccaatgggacaggg gcttcggaaacagcagacgacgatcttcccagcgtcatgacttgcgccaactaccttaag ctccctccttattctacaaaggaaatcatgtacaagaaactgctctacgccatcaacgaa gggcaggggtcgttcgacctatcctag

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