Brassica napus (rape): 106361564
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Entry
106361564 CDS
T04128
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106361564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106361564
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106361564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
106361564
NCBI-ProteinID:
XP_048593856
LinkDB
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Position
A8:17470374..17472202
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AA seq
382 aa
AA seq
DB search
MDSDQGKLFVGGISWETDEDKLREHFSSYGDVSQAIVMRDKLTGRPRGFGFVIFSDPSLL
DRVLQDKHHIDSREVDVKRAMSREEQQVSGRSGSFNATRGSGGDAYNKTKKIFVGGLPPT
LTDEEFRLYFEQYGPVADVVIMHDQTTSRPRGFGFVSFDSEDAVDRVLQKNFHDLNGKQV
EVKRALPKDANPGGAGRAMGGGGGGGYQGFGGNEGGFDGRMDFNRYMQPQNVGNGLPSYG
GSSGYGAGGGYGNGSNGAGFGGYGGYGAGAGAAYGATGMPGGGYGSSVAPRNAWDTPSAP
SGYGNPGGYGNGAPQSGYGAPPAQTQYGYGGYSGSGDAGYGNQAAYGAVGGRPSVGGLNN
PGGGYMGGYDPSQGYGLGRQGQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggattcagatcaaggaaagcttttcgttggcggaatctcgtgggagacagacgaagac
aagctaagagagcatttcagcagctacggagatgtttctcaggctattgtcatgagagac
aagctcactggccgtcctaggggttttggtttcgtcatcttctccgatccttctcttctc
gatagggttcttcaagacaaacatcacattgattccagagaggttgatgtgaagagagca
atgtcaagagaggagcagcaagtctctggaagaagtgggagcttcaatgcaactagaggc
tctggaggagatgcttacaacaaaaccaagaagatctttgtcggaggcttgccgcctact
ttgacagacgaagagtttcgcctctactttgaacagtacggccctgtggctgatgttgtg
atcatgcacgaccagactactagccgtcctcgcgggtttgggtttgtctccttcgactct
gaagatgccgtggaccgtgtgcttcagaagaacttccatgatttgaacggtaagcaagtt
gaagtgaagcgtgctcttcctaaagatgctaatccaggtggtgctggacgagccatgggt
ggtggcggtggtggtggttaccagggttttggtggtaatgaaggcggttttgacgggcgt
atggatttcaataggtatatgcagcctcagaatgtaggaaatggtttaccgtcttatggt
ggttcttcaggttatggtgctggtggtgggtatggaaatggtagtaatggtgctggattt
ggtggatacggaggttatggtgctggagctggagctgcatatggagcgacggggatgcca
ggtggtggttatggaagtagtgttgctccgagaaacgcatgggacactccatcagctcct
agtggttatgggaaccccggagggtatgggaatggtgctcctcaaagtggatatggggct
cctccggctcagacacagtacggatacggagggtacagtggaagtggtgatgctggttac
ggtaaccaagctgcttatggtgcggttggagggagacctagtgttggggggttgaacaat
cctggtggtggctacatgggaggttatgacccgtcacaagggtatggtttgggtcggcaa
ggccaatag
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