Brassica napus (rape): 106361812
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Entry
106361812 CDS
T04128
Name
(RefSeq) putative rRNA methyltransferase YqxC
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106361812
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
106361812
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
106361812
Ribosome biogenesis [BR:
bna03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
106361812
23S rRNA modification factors
106361812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_11
PrmA
Methyltransf_24
Motif
Other DBs
NCBI-GeneID:
106361812
NCBI-ProteinID:
XP_013657065
UniProt:
A0A078IS48
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All DBs
Position
A3:20423402..20425626
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AA seq
305 aa
AA seq
DB search
MGSHVLKSPITLRSYSSSLVGFFSNSRNPLLSVRWVKAGEASSVRCLASAIRGKNKKQRL
DEACLERYQEYSRTLIQSWILQGKVLVDGKRASKAGMPVGNDVSIKITAEVPKYVCRGGL
KLEAAIEKLDVDVSEKVVLDSGLSTGGFTDCLLRYGAAHVYGVDVGYGQVADKIRNDKRV
TVMERTNVRYLPGLPQKVDVVTLDLSFISILKVMPAVMNVMNEDATLVTLVKPQFEARRS
QVGKGGIVRDPEVHQEVLERIINGVESCGFTNKGFIESPIKGADGNIEFLVRFDRGTVKK
TEEEE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcatgttcttaagtctcccattaccttgcgctcttacagcagctccctcgtg
ggcttcttctccaactctcgcaatcctcttctctctgtgagatgggttaaagcaggagaa
gccagttctgtcagatgtcttgcttctgctatacgtgggaagaacaagaagcagagactg
gatgaggcatgtctcgaaaggtatcaggaatacagtcgcactctaatacaatcatggatt
ctacaaggcaaagtgcttgtggatgggaaaagagctagtaaagctgggatgcctgtagga
aatgatgtatccataaagattacagctgaggttcccaaatacgtatgtagaggtgggctg
aagttggaagctgcaatagagaagctagatgttgatgtttctgagaaagtggttcttgat
tctggactttctactggagggtttacagattgtttgcttcgttatggtgcagctcatgtg
tatggtgtggatgttggttatggtcaggttgcggataaaattcgtaatgacaagagagtg
actgttatggaaaggacaaatgtgagatacctcccaggtctcccacagaaagtcgatgta
gtgacacttgatctctcattcatttccattctcaaggtgatgccagctgttatgaatgtg
atgaatgaagatgcaactttagttaccctagttaagcctcaatttgaagctcgacgatca
caggttgggaagggtggtatagtgagagaccctgaagtacatcaggaggttcttgagagg
ataataaatggtgttgagagctgtggattcaccaacaaagggtttatcgaatctcccatc
aagggcgccgatggaaacatagagttcttggttcgcttcgaccgagggactgttaagaaa
accgaagaagaagagtag
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