Brassica napus (rape): 106361867
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Entry
106361867 CDS
T04128
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
bna04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106361867
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106361867
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106361867
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106361867
03036 Chromosome and associated proteins [BR:
bna03036
]
106361867
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106361867
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106361867
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106361867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
HEAT_EF3_N
Htt_N-HEAT_1
HEAT_EZ
Adaptin_N
SCD
CLASP_N
TAF6_C
Cnd1
HEAT_DAAF5
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
106361867
NCBI-ProteinID:
XP_013657128
LinkDB
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Position
A8:18698026..18701459
Genome browser
AA seq
588 aa
AA seq
DB search
MAMVDEPLYPIALLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENSDDD
DEVLLAMAEELGVFIPFVGGIEHAHVILPPLESLCTVEETTVREKAVDSLCKIGSQMKES
DLVDSFVPLVKRLAAGEWFAARVSACGLFHVAYQGCTDVLKTELRSSYGQLCQDDMPMVR
RAAASNLGKFATTLESAFLNAEIMTMFDGLTKDDQDSVRLLAVEGCAALGKLLEPQDCVA
RILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDCTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCQLLNPELSIQHILPCVKELSTDSSQHVRSALASVIMGMAPILGKDSTIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
VPLLASQLGIGFFDDKLGALCMQWMQDKVYSIREAAANNLKRLAEEFGSEWAMQHIVPQV
LDMVNNPHYLHRMMALRAISLMAPVMGSEITCSKFLPVVVEAAKDRVPNIKFNVAKLLQS
LIPIVDQSVVDKTIRQCLVDLSEDPDVDVRYFANQALRSIDAAAVAQS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtggatgaacccttgtatcccattgctcttctcattgacgagcttaagaac
gatgacatccagcttcgtttgaactccattcgtcggttatctacgattgctcgtgctctt
ggagaggagcgtacaaggaaagagctgattccctttttgagtgagaacagtgatgatgac
gatgaggtgctcctcgcaatggctgaggagttgggagtttttattcccttcgttggtggg
attgagcatgctcatgtgattctccctcctcttgaatctctctgcaccgttgaggagacc
actgtgagagagaaagctgtggactcgctttgtaagattggttctcagatgaaggagagt
gacctcgtcgactcctttgtccctcttgtcaagaggcttgcggctggtgagtggtttgca
gcgagagtttccgcatgtggtttgtttcatgttgcgtaccaaggttgtactgatgtgctg
aagactgagttacggtctagttatggtcagttgtgccaagatgatatgcctatggtgcga
agagctgctgcgtctaacctggggaagtttgctactactctggagtctgcctttttgaat
gctgagatcatgactatgttcgatggtcttactaaagatgatcaagattctgttagactg
ctggctgtggaaggctgtgcagctcttggaaagttgttggagcctcaggattgtgttgca
cgcattttacctgttatagttaacttctctcaggataaatcttggagggtgcgctacatg
gttgctaatcagctatacgaactttgtgaggcagtgggtcctgattgcacgaggacggat
ttggttcctgcatatgtgagattgctacgggacaatgaggctgaagtgcgaatagcagcg
gcggggaaagtgaccaagttctgtcagcttctgaatccagagctttccattcagcacatc
cttccttgtgtaaaggaattatcaactgattcttctcaacatgtccgctctgctctagct
tcagtaataatggggatggctcctatccttgggaaggactcaaccattgagcatcttcta
ccaatttttctttcccttttgaaagatgagtttcctgatgtacgcctcaacatcataagc
aagctagaccaagtcaaccaggttattgggattgatctgctatcacaatccttgttgccg
gcgatcgtagagcttgctgaggatcggcactggagagtcaggcttgctataattgagtat
gttcctctgttggctagccagttaggtatagggttcttcgatgacaagctcggagccctt
tgcatgcagtggatgcaagacaaggtctactctatccgtgaagctgcagcaaacaaccta
aagcgccttgcagaggagtttggttctgaatgggcaatgcagcacatagttccccaggtg
ttggacatggtcaacaatccgcactacctacacaggatgatggctctacgtgcaatatct
ctcatggctcctgtaatgggatcagaaatcacgtgctctaagtttcttcctgtggttgtt
gaggcagcaaaagacagagttccaaacatcaagttcaatgttgctaaacttctgcaatcc
ctcatccccatagtcgaccaatccgtggtggacaaaacaatccgtcagtgtttggtggac
ctgagcgaggaccctgatgttgatgttcgctattttgcaaaccaagcgcttcgttccatt
gacgctgcagcagtggcgcaatcctga
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