Brassica napus (rape): 106361904
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Entry
106361904 CDS
T04128
Name
(RefSeq) protein NPGR1
KO
K21843
tetratricopeptide repeat protein 7
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106361904
Membrane trafficking [BR:
bna04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
106361904
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_2
TPR_14
TPR_8
TPR_17
ARM_TT21_C
TPR_11
ARM_TT21
Peptidase_C101
TPR_4
Motif
Other DBs
NCBI-GeneID:
106361904
NCBI-ProteinID:
XP_013657169
UniProt:
A0A078FFN6
LinkDB
All DBs
Position
C3:55963588..55966669
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AA seq
702 aa
AA seq
DB search
MLCACSGEQFRFDDQPGSPESLATRDFSASGLSSSTRTRGGADWDSKLEESQVDEAESTL
KEALSLNYEEARALLGRLEYQRGNFDAALQVFKGIDIKVLTPRIIKAIVDRTRPCNKPPR
SSKAVTLPPPTSMSMHSVSLLLEAILLKATSLEELGSCKEAAEECKLILDMVESALPSGM
PPQGLSGFDKLQEVFHKALELLPSLWTKAGDFHETVASYRRALSRPWNLDPQRLAVTQKS
LALVLLYGSVEASTKDSMEEAIVLLMLLVKKMVVGGIQWDAELMDHLTYSLSMVGQFEVL
ASYLEQILPGVYTRGGRWYLLSLCYSAAGIDKTAINLLKLALGPSESRQIPQASWLLFGA
KLCSEDPQHSRDGINCSHKLLDLANNQSEHLFRQAHRFLGVCYGNAARSSKLDSERVLLQ
KKSLYSLNKAATMAKGDPEPDVVYNLSVENAFQRNLQAALDGAVEYSSMVGGVSTRGWKH
LAAVLSAEKRLKDAESILDFTMEEAGDMEKLDLLKLKAVLQMAQEQPKQALKTCSNFLAL
IRAQEKSEQSKTLLKKYETEAWQDLASVYGKLGSLSDAETCLDKARSISFYSPRGWNETG
LCLEAKSLHEEALIAFFMSLSIDPDHVPSIVSIAEVMMKSGGDTLATAKSFLMNALRLDP
RSHDAWMKLGHVAKMQGLSQQAAEFYQAAYELELSAPVQSFI
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgtgcttgttcaggcgagcagttccggttcgatgaccagcctgggtcaccggag
tcactagctacacgagatttctcagccagtggcctttcttcttccaccagaactcgagga
ggagccgattgggactccaaactcgaagagtctcaggtcgatgaagccgaatcgactcta
aaagaggctctctccctcaactacgaggaagctagggctttgcttgggagacttgagtat
cagagaggtaacttcgatgcagcgcttcaggtctttaaagggattgacattaaggtccta
actcccaggattatcaaagccattgtcgacagaactcgtccttgcaataaaccaccacgc
tcctccaaagctgttactctccctcctccaacctccatgtcaatgcattccgtcagcttg
cttcttgaagctatcttgcttaaagctacatcacttgaggaactcggctcttgcaaagaa
gctgcagaggaatgcaaactaatccttgacatggttgaatctgcactaccaagtggcatg
cctcctcaaggactcagcggattcgataaactgcaggaagttttccacaaggcgctcgag
ctgcttccttcgctatggacgaaagctggagactttcatgagaccgttgcttcgtatcgc
cgtgctttatccagaccgtggaatctggatccccagaggttagctgttacgcagaagtct
ttagctttggttttgctttacggaagcgttgaggcgagcacaaaggacagcatggaggag
gccattgtgttgttaatgttgcttgtgaagaagatggtggttggaggaatacagtgggat
gcagaactcatggatcatctgacttactctctttccatggttggacagtttgaagtgttg
gcgagctatctggagcagattcttcctggtgtttacactagaggggggagatggtacctg
ctttcgctttgttacagtgctgcagggatcgataaaactgccattaatctattgaagctg
gcccttggtccttcggaatcaagacagataccgcaggcttcttggttattgtttggggca
aagctatgctctgaagatccacaacactcaagggacgggataaattgttctcacaagctg
ctcgacttggctaataatcagagtgaacatcttttccgccaagcgcacaggttccttggt
gtatgctatggaaacgctgcaagaagttccaaactagactctgaacgggttttacttcaa
aaaaaatctctatactctctaaacaaagctgcaacgatggccaagggtgatccggaacca
gatgttgtatataacttaagcgttgaaaatgcgtttcaaagaaaccttcaggcggctttg
gatggcgcggttgagtattctagtatggtgggaggtgtttcgactagaggatggaaacat
ctagctgctgtcctttcagcagagaaacggctcaaggatgcggaatctattcttgatttt
accatggaagaggctggtgacatggaaaagttagaccttctgaagttgaaagctgtgctt
cagatggctcaagaacaacctaagcaggcattgaagacatgcagtaactttctggctcta
atccgggcgcaggagaagtctgaacaatccaagactctgctaaagaaatatgaaacggaa
gcttggcaagacctggcctctgtctatggaaagctaggttcattgtcagatgcagaaaca
tgtctggacaaggcaagatccatctccttttattctcccagaggctggaatgaaacaggt
ttgtgtcttgaagctaaatcacttcatgaagaggctttgatagccttctttatgtcactc
tcgatagatccagaccacgttcccagcattgtttctatagcagaggttatgatgaaatcc
ggaggtgatacacttgcaaccgctaagagttttctgatgaacgccttacggttagacccg
agaagtcacgacgcgtggatgaagctaggacatgttgctaaaatgcaaggcttatcacag
caagctgcagagttttaccaagctgcgtatgaactagagttgtcggctccggttcagagt
ttcatctga
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