Brassica napus (rape): 106362097
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Entry
106362097 CDS
T04128
Symbol
BNACNNG39590D
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
106362097 (BNACNNG39590D)
Enzymes [BR:
bna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
106362097 (BNACNNG39590D)
Glycosyltransferases [BR:
bna01003
]
Polysaccharide
Structural polysaccharide
106362097 (BNACNNG39590D)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
106362097
NCBI-ProteinID:
XP_013657369
UniProt:
A0A078JCE0
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All DBs
Position
C8:27811457..27814084
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AA seq
499 aa
AA seq
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MEARSDSSQARSGDNKLPPPAAPKPRVQVWFVTVCSTILIWTCLVQLFAAGELWRTRIFT
GQVSRFSAPVEPVPLPPPLPPPRNYTSNGILLVSCNGGLNQMRSAICDMVTVARLLNLTL
VVPELDKTSFWADPSGFEDIFDVRHFIDSLRDEVRIFRRLPKRYSSKYGYKMFEMPPVSW
SDENYYLKQVLPLFSKHKVVHFNRTDTRLANNGLSLPLQWLRCRVNFQGLKFTPQLEALG
SKLVRILQQRGPFVALHLRYEMDMLAFSGCTHGCSEEEAEELKKMRYTYPWWREKEINSE
ERRAQGLCPLTPEEVALVLKALGFDKNTQIYIAAGEIYGSEHRLSVLREAFPRIVKKEML
LESSELQQFQNHSSQMAALDFMVSVASNTFIPTYDGNMAKVVEGHRRYLGFKKTILLDRK
RLVELLDLHNNSTLTWDQFAVAVKEAHERRTGAPTHRRVISDKPKEEDYFYANPQECLCE
GTNCHDLYGRQTNYSSLTR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaagctagatcggattcgagtcaggcgcggagcggcgataataagcttccgcctccg
gcagctccgaagcctcgcgtacaagtctggttcgtcacggtctgctccaccattttgatt
tggacttgtttggtccagcttttcgccgccggggagctttggcgtacgcggatcttcacc
ggtcaggtttctagattttcggcccccgtcgagccggttccgttgccgcctcctcttcct
cccccgagaaactataccagcaatggtattctgcttgtatcgtgcaatggcggacttaat
cagatgcgatccgcgatttgtgatatggtgactgttgctcggctacttaacctcactctc
gttgttcctgagcttgacaaaacttctttctgggctgatccaagtgggtttgaggatatt
tttgatgtgagacattttattgattcattaagagatgaagttcggatctttaggaggctt
cctaaacggtatagcagcaagtatggatacaagatgttcgaaatgcctcctgtcagctgg
tctgatgagaactattacctgaagcaggtgttgcctcttttcagcaaacataaggttgtg
catttcaataggacagacacccgcctggcaaacaacggtctttcgctcccactccagtgg
ctcaggtgccgggtgaacttccagggacttaagttcactcctcagcttgaggctttgggg
tctaagctagtccgcattctacagcaaagagggccctttgtggctttgcatctgagatat
gagatggatatgttagctttctctggttgcactcatggttgcagtgaggaagaagctgaa
gagctcaaaaagatgaggtacacatatccctggtggagagagaaggagataaactcagag
gagaggagggcgcaagggctgtgtcctctgacgccagaggaggtggcattggttctaaaa
gcattgggattcgacaaaaatacacagatatacattgcagctggtgagatttatgggagc
gagcatagattgtccgttctaagggaagcattcccgagaattgtaaagaaggaaatgcta
ctggagtcgtcagagttgcagcagtttcagaaccattcgtctcaaatggctgctctagat
ttcatggtatctgtggccagcaacacttttattcccacgtatgatggaaacatggcaaaa
gtcgtggaaggtcatcggagatacctcgggtttaagaagacaatcctgcttgaccgcaag
agactcgtggagctacttgacttacacaacaacagcaccctcacgtgggatcagtttgca
gtagctgtcaaggaagcacacgagagacgaacaggagcacctacacatcgaagagtgatc
tccgacaaaccaaaggaggaagactacttctacgctaaccctcaagaatgtctttgtgaa
ggtacaaattgccacgacctgtatggccgccagacaaactactccagtttaacacgttga
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