KEGG   Brassica napus (rape): 106362115
Entry
106362115         CDS       T04128                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106362115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106362115
Spliceosome [BR:bna03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106362115
 Complex B
    106362115
 Complex C
   U2 SnRNP specific factors
    106362115
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 106362115
NCBI-ProteinID: XP_048594145
LinkDB
Position
A8:complement(20873839..20877450)
AA seq 784 aa
MLSSMQILPLEAPPTDGNLGPLPPSQLTDQEIEERELQSEQKSSNQAPESVATHTRTIGI
IHPPPDIRSIVEKTAQFVSKNGLEFEKRIMASNAKNAKFNFLTSSDPYHAFYQHKLAEYR
AQNEDGAQGSDADGADLQVDGGGDEGEAGEAQPDLQAQFRVPPKPLEPPEPEKYTVRLPE
GITGEELEYIKLTAQFVARNGKSFLTGLQSRENNNPQFFFMKPTHSMFPLFTALVDAYFD
VLKPPEDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQRKKEEDEKEQERVQMAMIDWH
DFVVVESIDFADDEDEELPPPMTLEEVIRRSKVSAAMEEDDVVEPGKEVEMEMDEEEMKL
VADGMRAANLEENGGYVKIDNMNEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGELI
PINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEE
EVSNAVKAEIEKKKDEQPSQVIWDGHTGSIGRTANQALAQNANGEEQGNGVYGDPNSFPG
PAALPPPRLGVPVVRPLPPPPNLALNLPRPPPSVQYPGPPRPLGVPMMQGMHPQHQLSMP
GQPGHPSMMMMNRPPQMQAGMHVPPPPGSQFAHLQVPRPYGQLAPPPMGMMQPPPMHGMP
PPPPPGEAPPPLPEEPEPKRQKFDESALIPEEQFLAQHPGSATIRVSVPSVDDGQVIEIT
VQSLSENVGSLKEKIAGETQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERG
GRKR
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgttaagctcgatgcagatactgcctctcgaggctcctcccaccgacgggaacctcggt
cctctccctccttcgcagctaacggatcaagaaatcgaagagagagagctgcaatcagag
cagaagagctcgaatcaagctcctgagtctgtagctactcacacgaggactattggtatc
attcacccgcctccagatatcagaagcatcgtcgagaaaacggcgcagtttgtatccaag
aacggtttggagtttgagaagaggatcatggctagcaatgccaagaatgctaaattcaac
tttctgactagctcagatccgtatcatgcgttttaccagcataagctcgctgaatatcgt
gctcagaacgaagatggagctcagggtagtgatgcagatggtgcagatcttcaagttgat
ggtggtggtgatgagggtgaagcaggtgaggcgcagcctgaccttcaggctcagtttagg
gttcctcctaagcctttagagcctcctgagcctgagaagtatacagttagacttcctgaa
gggattacaggcgaggagcttgagtatattaagctcacggctcagtttgtggcacggaat
gggaagtctttcttgactgggttgcagagtagagagaataacaatcctcagtttttcttt
atgaagccaactcatagcatgttccctttgttcactgccctggttgatgcgtacttcgat
gtgttaaagcctccggaagacttgaaagagaagctgaggaagagtgctgctgatttgacg
acggttcttgagcgttgtttgcatcgtcttgaatgggatcgttctcaggagcagcagagg
aagaaagaagaggacgagaaggagcaggagagagtgcagatggctatgattgattggcat
gattttgtggttgtggagtctattgattttgctgacgacgaggacgaggagttgccaccg
cctatgacgcttgaggaggttataaggaggagcaaagtatcggcagcgatggaagaagat
gacgttgtggagcctggaaaggaagttgagatggaaatggatgaagaagagatgaagctt
gttgcggatggaatgagagcagcgaacctggaagagaatggtggctatgtgaagattgac
aatatgaacgaagaagcacctatgagaattgttaagaactggaagaggccagaagatagg
atcccgacagagagagatcctactaaagttgttatatctccaattactggcgagttgatt
cccatcaatgagatgtctgagcacatgcggatttcgcttattgatcccaagttcaaggag
cagaaggaccggatgtttgctaagattcgcgagaccactcttgcacaagatgatgagatt
gctaaaaacatagtcggacttgctcgtctgcgtcctgatatttttgggacaactgaagaa
gaagtctcaaatgctgtaaaagcggagattgagaagaagaaagatgagcagccaagtcaa
gtaatatgggatggtcacacaggaagtataggtcgcacagcaaaccaagccttggctcag
aatgctaatggagaagagcaaggtaatggcgtttatggagatcccaatagcttccctggt
ccggctgctcttcctcctcctcgcctaggtgtcccagtagtccggccactgccaccacct
cccaatctcgccttgaacctccctcgccctcctccttctgttcagtaccccgggccaccg
aggccattaggtgttccaatgatgcaaggcatgcatccacaacaccagctctcgatgcct
ggacaacctggacacccgtcgatgatgatgatgaaccgaccaccacaaatgcaggcgggt
atgcatgtgccgcctccaccgggatcacaatttgctcatcttcaagttccgagaccttat
ggtcagcttgcaccacctcctatggggatgatgcaaccaccacctatgcatgggatgcct
cctcctccaccccctggggaagcaccaccgcctcttcctgaggagccagagccgaagaga
caaaaattcgacgagtcagctcttattcccgaagaacaatttcttgctcagcatccgggc
tcagctacgatccgtgtctctgttccaagtgtggatgacgggcaggtcattgagatcaca
gtgcagtcattatccgaaaatgtaggaagtttgaaggagaaaatagctggtgaaacacaa
attccagcaaacaaacaaaagttaagtggcaaagctgggttcttaaaggacaacatgtcg
cttgctcactacaatgtcggagcaggagaaatcttaacactgtctttgagagaacgtggt
gggagaaagagataa

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