KEGG   Brassica napus (rape): 106362321
Entry
106362321         CDS       T04128                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bna01009]
    106362321
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106362321
Enzymes [BR:bna01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     106362321
Protein phosphatases and associated proteins [BR:bna01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106362321
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106362321
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 106362321
NCBI-ProteinID: XP_013657653
LinkDB
Position
A8:complement(22159486..22165204)
AA seq 1145 aa
MGTELMRICVKEESDELPSVPPGFESYATFTLKRVVPDPGAAMESVSSVSNQGEMEIESD
EAKAARSLRRRPWINYDDDSNALSQNLDQTCGVKPSLPKGVTRGCAECNDCQKVTARWQP
DEARRPDLEDAPIFHPTEEEFEDTLSYIAKIRPKAEKYGICRIVPPPSWKPPCPLKEKQV
WEGSKFTTRVQRVDKLQNRSSMKKVSKLSNQMRRKKRKCMKMGMDPGSASPEMSELETFG
FEPGPGFTLKDFKKYADEFKAQYFKKSETSTDSECTWEPAVEDVEGEYWRIVDKATEEIE
VLYGADLETGVFGSGFPKISSSHEAASSSEEKYAKSGWNLNNFSRLPGSLLKHEGSDISG
VLVPWLYIGMCFSSFCWHVEDHHLYSMNYMHWGAPKLWYGVAGKDAVKLEEAMRKHLPDL
FEEQPDLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNCGFNCAEAVN
VAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAAREVVKADWELNLLKKNTIDNLWWK
EFSGKDGILAATLKARIDMERTRREVLCSSSLALKMHSNFDATNERECCICFFDLHLSAA
GCRCSPEKYSCLTHVKQLCSCPWVAKYYLFRYDMDELNVLLEAVEGKLSSVYRWARQDLG
LALSEHLSGSKMETSEEEPQAGALLGKDLQLKVTSREDLSRGLEKTLLLKVKEEQLTPSH
CMKPVKEEESISMTAAKSTSGKKSSQSVPDDVILLSDDEHDIPRKQVSEKRDAVSSGKHL
KIQERPTHVLALEAPSKTAAPMIEKQANSLPDRQITMPLPTNDQRAVQGDVTSSVSHAEV
NAVADGLAHNTSNQDGVNPTSSKSKISGGLAIQEVVDGIRSTSGTPSCSQNNSPDRIIRQ
KGPRIAKVVRRINCNVEPLNYGCVLSGKSWCNRRAIFPKGFRSRVKYINVLDPTRMSFYV
SEILDTGRNSPLFMVYLEGVPSEVFAHLSPTRCWEMVRDRVNQEISKQHKAGKLDLPPLQ
PSGSPDGFEMFGYTSPAILQAIEALDVNRVCTEYWDSRPYSRPQVQFPANALLLREANTS
IQSSDVRNLQKAPRQRLLPAGTKSNLKVLLKKANMEELSSLQEVLSESNIDLVTELVKEE
IQKRG
NT seq 3438 nt   +upstreamnt  +downstreamnt
atggggacagagctgatgagaatctgtgtgaaggaagaaagtgatgagttgccatctgtt
cctcctgggtttgaatcatatgctactttcaccttaaaaagagttgtccctgaccctggt
gctgctatggaaagtgtttcttctgtatcaaatcaaggtgagatggagattgaatctgat
gaagccaaagctgctcggtctctacggcgtagaccttggattaactatgatgatgatagc
aatgccttgtctcaaaatcttgatcaaacttgtggagtgaagccttctctacctaagggt
gtgaccagaggatgtgcagaatgtaatgactgccaaaaggtaactgcgagatggcaacca
gatgaagctcgaaggcctgaccttgaagatgcccctatattccaccctaccgaagaggag
tttgaagatactttgagctatatagctaaaataagaccaaaggctgagaagtatggaatc
tgccgcattgttcctcctccttcctggaaacccccttgcccgctgaaagaaaagcaagta
tgggaaggttctaaattcaccacacgcgtccaaagagtggataagcttcagaaccgaagc
tctatgaagaaggtttcaaagctttctaatcaaatgagaaggaagaagaggaagtgcatg
aaaatgggaatggatcctggctccgcaagcccagaaatgagtgagcttgagacgtttggg
ttcgaacctggtccagggttcactctaaaagacttcaaaaagtatgctgacgagttcaag
gctcagtactttaaaaagagtgaaacatctacggacagtgaatgtacatgggagccagcg
gttgaggatgttgaaggtgaatattggcggattgtagataaagctaccgaagagatagag
gtgctgtatggtgctgaccttgaaactggggtatttggtagtggttttcccaagatatca
tctagtcacgaggctgcttcttcttcagaagaaaaatatgcaaaatcaggctggaactta
aataatttctcaaggcttccaggatcacttcttaagcatgagggaagtgatatctctggt
gttcttgtaccgtggttgtatattgggatgtgcttttcttctttctgctggcatgttgaa
gatcaccacttgtattcgatgaattacatgcactggggtgcaccaaaactgtggtacggt
gttgcggggaaggatgctgttaagctagaggaggcgatgagaaagcatttgcctgacctt
ttcgaagaacagcctgatttgcttcacaagctagttacacaactctccccatcaaaactg
aaaaccgcaggagtacctgtgcaccgttgcgtccagcatgctggagagtttgtcttgact
ttccctcgggcatatcatgctggattcaactgtggtttcaactgtgccgaagctgtgaat
gtcgcaccggttgactggctgcctcatgggcagattgctatagagttatactgccaacag
ggtagaaaaacgtcaatctcgcatgataaactcttgcttggggcagcaagagaagtagtg
aaagccgactgggagcttaacttgctaaagaagaatacaatagataacttgtggtggaaa
gagtttagtggaaaggatgggatcttggccgcaacactcaaggcacgcattgacatggaa
cgaacaagaagagaggttctgtgcagctcttcacttgcgttgaagatgcatagtaatttt
gatgctaccaacgagagagagtgttgtatatgcttctttgatttgcacctgtccgctgct
ggttgccgttgttccccggagaagtattcatgtttgactcatgtgaagcagttgtgttcc
tgtccgtgggtcgctaaatattatctgtttcgctatgatatggatgaactgaatgttctt
cttgaggctgtggaaggaaaacttagttctgtgtatagatgggcgcgtcaagatttggga
ttggctttaagtgaacacctctcaggaagcaagatggagactagtgaggaagaaccacaa
gcaggtgcacttttagggaaagatttacagttaaaagtaacatcgagagaagatctaagt
agagggttagaaaagacgttacttctgaaagtcaaggaggagcaattaacaccaagccac
tgtatgaagccagtcaaagaagaagaaagcatctctatgactgccgctaagtccacaagt
ggaaaaaagagttcacagagtgtacctgatgatgtgatactcctaagtgatgatgagcat
gacatacctaggaaacaagtttctgagaaaagagatgcagtttcgtctggaaagcatttg
aaaatacaggagagaccaacccacgttttagcgttagaagctcctagtaaaactgctgct
cccatgatagaaaagcaagcaaattctttgcctgatagacaaatcactatgccattgcct
actaatgaccaaagagcagtgcaaggggatgttacaagttctgtatcgcatgctgaagtt
aatgccgtagctgatggacttgctcataataccagcaaccaagatggtgtaaaccctact
agctctaaatccaaaatctctggaggtttggctatacaggaagtggttgatgggataaga
agtacctctggtacaccgtcttgttcgcaaaacaatagtccggataggatcatccgccaa
aagggtccacgtatagcaaaagttgtgaggagaatcaattgcaatgtagagcctctaaac
tatgggtgtgtgctttctggaaaatcatggtgcaaccgccgagcaattttccctaaaggg
tttcgtagtcgggtcaagtacataaacgttttggatccgacgaggatgagcttctacgtt
tcagagattcttgatactggacgcaacagtccattgttcatggtttacttggagggtgtt
cccagtgaggtgtttgctcacttgtcgcctacaagatgctgggagatggtaagagataga
gtaaatcaagagataagtaagcagcacaaagctggtaagctagatcttcctcctctgcag
ccatctgggagtcctgacggttttgaaatgtttggatacacgtcacctgcaatcctacag
gctattgaagcattagacgtgaatagagtttgcacagagtattgggactccaggccttac
tcgcggccacaggttcagttccctgcaaatgctcttcttctcagagaagccaacacaagc
atacaatcatcggatgtgagaaatctccagaaagctcccagacaacgtctattacctgct
ggaacgaagtctaatctcaaagttctgctcaagaaggctaacatggaggaactgagctca
cttcaagaggttttaagtgagtctaacatagatttggtgaccgaacttgtgaaggaagag
atccagaagcggggctga

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