Brassica napus (rape): 106362403
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Entry
106362403 CDS
T04128
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106362403
04121 Ubiquitin system [BR:
bna04121
]
106362403
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
106362403
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
106362403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
NCBP3
Motif
Other DBs
NCBI-GeneID:
106362403
NCBI-ProteinID:
XP_013657749
LinkDB
All DBs
Position
A8:21783916..21788048
Genome browser
AA seq
1116 aa
AA seq
DB search
MSSQVRRDRPRSNPHQTWVPRGAANSVAAAVVNEPSLPPPANTDRTSESLDAGAAASRPL
RQRNGSARPSYNNHQRSNNVVGPPPPSRQRRNNAPGILPDYRHRVASRTQPVNQGKKVVK
EEENTTVLADANLPQLVQELQDKLVKSSIECMICYDMVGRSANIWSCSSCYSIFHMHCIK
KWARAPTSVDLLAEKNQGDNWRCPGCQSVQLTSSREICYRCFCGKRKDPPSDPYLTPHSC
GEPCGKPLEREVSAVAEMDRDDLCPHVCVLQCHPGPCPPCKAFAPPRSCPCGKKMIHTRC
SERRSVLVCGQRCEKLLDCGRHRCERTCHVGPCDPCQVPVSATCFCKKKAETVICGEMNV
KGELKADDGVYSCNFNCGKPLGCGNHFCSEVCHPGPCGDCELLPSRVKTCYCGKTRLEEQ
SRSSCLDPIPSCSNTCRKVLPCGLHTCNEVCHSGDCPPCLVKVNQKCRCGSSFRTVECYF
TTSSETEKFVCAKSCGRKKNCGRHRCSERCCPLLNAKKNYLSGDWDPHACQLPCGKNLRC
GQHSCESSCHSGHCPPCLEMIFTDLTCACGRTSIPPPLPCGTPVPSCQLPCSIPQPCGHS
ATHGCHFGDCPPCSAPVEKKCVGGHVVLRNIPCGLKDIRCNKICGKTRRCGLHACARTCH
PEPCDGYNESEAVSRVTCGQTCGAPRRDCRHVCAALCHPSLPCPDSRCEFPVTITCSCGR
LTATVPCDAGGESAGNLRVGSVNETSVLNKLPTPLQPVESSDNRIPLGQRKLSCDDECAK
QERKRVLQDAFDITTPNLDSLHFSENSAMTEIISDIYRRDPKWVLAVEERFKFLVLGKAR
GSTSALKVHVFCPMQKDKLDTVRLLAERWKLAVSNGGWEPKKFIVVHVTQKSKPPTRIIG
ARGGAISVGGPHPPSFDPLVDMDPRLVVSLLDLPREANVSAVVLRFGGECELVWLNDKNA
LAVFHDPARAATAMRRLDHGSVYNGAVVVQNAAQSQSLGNNAWGKLPSSSSWDVQKANPW
KKAVIQESDDSWGADDSPIGGSSTDTQASAWRSATSNAPIVTSANRWSVLEPEKPKTSAL
EPLVQSGESSSSEAAGKKLVEGSGEEVVDDWEKVCE
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcaagtcagaagagacaggcctcgttccaatcctcaccaaacatgggttcct
agaggtgcagctaactctgtggcagcggcggttgtgaatgagccttctttacctcctcct
gctaatacagaccgaacttcagaaagccttgacgctggtgctgctgcttcacgtcctctt
cggcagcgtaacggttctgctcgtccctcttataacaaccaccaaaggagtaataatgtt
gttggtccgcctccacctagtcgacaaagaagaaataatgctccgggaattttgcctgat
tatcgccatagagttgcgtctaggactcagcctgtgaatcaggggaaaaaggtggttaag
gaggaggagaacactactgtgttggcagacgcgaacttgcctcagcttgttcaagagtta
caagataagctggtgaagagctctattgagtgtatgatttgttatgacatggttggacgg
tctgctaatatatggtcttgctcaagctgttactccatcttccacatgcattgtatcaag
aagtgggctcgagcaccgacttctgttgatctgttggctgagaagaatcaaggcgataat
tggaggtgtccgggttgccaatctgtgcagctgacgtcgtcaagagagatatgctatcgg
tgcttttgtgggaagagaaaggatcctccatctgatccgtatctgactcctcactcatgc
ggggagccatgtgggaagccgctggagagagaggtttctgcggtagctgagatggataga
gatgatctttgtcctcatgtctgtgtcctgcagtgtcaccctggtccatgtcctccctgt
aaagcgtttgctccacctcggagttgtccttgtggcaaaaagatgattcatactcgatgc
tctgagcggagatctgttcttgtttgtgggcagcgttgcgagaagcttctcgactgtggg
cgtcatcggtgtgaaaggacttgtcacgttggcccttgtgatccttgtcaggtaccagta
agtgccacttgtttctgcaagaaaaaagcggagactgttatttgcggagagatgaacgtg
aagggagagttgaaagcagacgatggtgtgtattcatgcaattttaactgtgggaagcct
cttggatgtggtaatcatttctgctccgaggtttgtcatcctggaccttgcggggactgt
gagttactgcccagtagagttaagacgtgctattgtggaaaaacgcgtctagaagagcag
agcaggagtagttgcttggacccgattccttcttgttcaaacacgtgcaggaaggttctt
ccgtgtgggttacatacttgcaacgaagtttgccattcgggtgattgccctccttgttta
gtcaaagtcaaccagaaatgccggtgtgggtcatcattcaggaccgtggaatgctacttc
acaacctcttcggagacggagaagtttgtgtgcgctaagtcatgcgggcgtaagaaaaac
tgtgggaggcatagatgtagcgagcgttgctgccctctcttgaacgcgaagaaaaattat
ctatctggtgattgggaccctcacgcctgtcagttaccatgtgggaagaacctaaggtgc
ggacagcattcttgtgaatcgtcatgtcacagtggccattgtcctccttgcctcgaaatg
atattcactgatcttacatgtgcttgtggaagaacttcgattcctccaccactaccttgt
gggacacctgttccgagctgccagcttccatgctcgattcctcagccttgtggccattct
gctacgcatggatgccattttggagattgccctccttgttctgcccccgtggaaaagaaa
tgtgttggtggtcacgtggttctcagaaacataccttgtgggttgaaagacattagatgt
aacaagatctgtggcaagacgagacgttgtggcttgcatgcttgtgccagaacctgtcac
ccagagccttgtgacggttacaatgaatctgaagcagtttcgcgtgttacatgtggacag
acatgtggtgctcctagaagagattgcaggcacgtttgtgcagcactatgccatccttct
ttgccttgccctgactcgagatgtgagtttccagttacaattacatgttcttgtggtcgc
ttaactgccacagtcccttgtgatgctggaggagaaagcgccggcaatcttcgtgttggt
tctgtcaatgaaacctctgttttgaataagcttccaacgccacttcagcctgttgagtcg
agcgataaccgaatccctctcgggcagagaaagctttcgtgtgatgatgagtgtgctaag
caggagcgtaagagggttcttcaggatgcgtttgacatcacaactccaaatcttgactca
ttacatttcagcgagaactctgctatgacagagataatttcagacatctataggcgtgat
ccgaagtgggtactggctgttgaagagcgcttcaagttcctggtacttgggaaagccaga
ggaagcacaagtgccctcaaggtccatgtcttctgcccaatgcaaaaggataaactagac
acggttcggcttctagctgagaggtggaaacttgcggttagcaacggagggtgggagcca
aaaaagtttatagttgttcacgttacacaaaagtcgaaacctccaacacggatcattgga
gctaggggtggtgctatctcagtaggcgggcctcacccaccgtcctttgatccgctggtg
gatatggatcctaggcttgtggtttctttattggatctcccgagggaggcgaatgtcagc
gcggtggtactgagatttgggggtgagtgtgagcttgtttggctgaatgacaagaacgct
ttggccgtgttccacgaccctgctcgagccgccactgccatgaggaggctggaccacggt
tctgtatacaatggagccgtggttgtccagaacgccgcgcaatctcagtcactcggtaat
aatgcatggggaaaactacccagcagctcatcctgggatgtccagaaagcaaatccatgg
aagaaagcagtgattcaggagagtgatgactcatggggagctgatgattcccccattgga
ggatcatctacagatactcaagcctctgcttggcgatcagcaacgagcaacgctccaatc
gtcacctcagctaaccgttggagtgtattggagccggagaagcccaaaacttccgctttg
gagccattggttcagtcaggagagagcagcagctcagaagctgccggtaaaaagctggtg
gaaggctctggggaagaagtggtagatgattgggagaaggtatgcgagtga
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