Brassica napus (rape): 106362415
Help
Entry
106362415 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106362415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106362415
03036 Chromosome and associated proteins [BR:
bna03036
]
106362415
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106362415
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106362415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
PilN
Motif
Other DBs
NCBI-GeneID:
106362415
NCBI-ProteinID:
XP_013657759
LinkDB
All DBs
Position
A8:21721127..21726773
Genome browser
AA seq
1044 aa
AA seq
DB search
MFGSSNPFGQSSGTGSSPFGTQSLFGQTSNTSSNNPFAPAPATPFGTSSPFGAQTGSSIF
GGTSTGVFGAPQASSPFGSTTTFGASSSPAFGSSTPAFGASPAPSPFGGSSGFGQGFSTP
QSNPFGSTAQQSQPAFGNSTFGSSTPFGATSTPAFGASSTPSFGATSTPSFGASSTPAFG
ATSTPAFGTSNQPSFGATNTPAFGASPTPAFGSTGNTFGNTGFGSGGAFGASSTPAFGAS
STPAFGASSTPAFGAAGAPSFGASSTPAFGASSSPAFGASSTPTFGASNTSSFSFGSSPA
FGQSTAAFGSTAFGSTPSPFGAQGAQASTPTFGSSGFGQSPFGGGQQQGGSRAVPYAPTV
EADTASGTPAGKLESISAMPAYKDKSHEELRWEDYQRGDKGGPRPTGQSPGNTGFGISAA
QPNPFAPSPAFGQTPANPTNPFSSSTSTNPFAPQTPAIASSGFGAATSTFGSSPFGVTSS
SNLFGSTPAATTSVFGSSSAFGTTTSSPLFGSSSTPGFGSSPSIFGSASGQGATSAFGNT
QSASLFSSNPSMPTGSAFGQTGSAFGQTGSAFGQFGQSSAPAFGQTNMFNKPSTGFGNMF
SSSSTLTTSSSSPFGQTTPAGMTPFQSSQPGQASNGFGFNNFGQTPAANATGTAGGMGFF
GQGNFGQTPAPPSSVVLQPVAVTNPFGTLPAMPQISINQSGNSASIQYGISSLPVVDKPV
SVRVSSLLTSRHLLQRRVRLPARKYRPDDNGPKVPFFTDDEETPSSTPKADALFIPRENP
RALVIRPAQQWSSRGKSTIPKERPTAPVHENGKSSDIATDAANHDKNGKREIGSTEESTH
PSANGNQKSNGTTSTDHAVEKDRPYRTLGGNRAGEAATDIEALMPKLRQSDYFTEPRIPE
LAAKERADPGYCSRVKDFVVGRHGYGSIKFMGETDVRRLDLESLVQFNNREVIVYLDESK
KPAVGEGLNKPAEVTLLNIKCVDKKTGKQFTEGERVDKYKMMLKRKAEAQGAEFVSFDPV
KGEWKFRVDHFSSYKLDEEDDDEA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtttggatcatctaatccttttggacagtcatctggtactggtagcagcccgtttggg
acccaatcgttgtttggtcagaccagcaacacaagcagtaataatccctttgctccagct
ccagctacaccgtttggaacatcttcaccttttggtgcacagactgggagttcaatcttt
ggtggcacttcaaccggtgtgtttggtgcacctcaagcctcctctccgttcggctctacc
acaacttttggagcttcttcatctccagcatttgggagttctactccggcctttggagca
tccccagcaccttcaccttttggtgggtcttctggttttgggcagggattttcaacgcct
cagtcaaatccttttggaagcacagcgcagcaatctcaacctgcatttggaaacagcact
tttggttcatccacaccttttggtgccacgagcacgcctgccttcggtgcatcaagcacg
ccttccttcggcgctacaagcacaccctcatttggtgcatcgagcacgcctgcctttggt
gccacaagcacgcctgccttcggcacctctaaccagccttcatttggcgccacaaacaca
cctgcatttggagcttcaccgactccagcctttggtagcactggcaacacgtttgggaac
actggctttggttctggaggtgcttttggagcttctagcacccccgcttttggtgcatca
agcacacctgcttttggtgcatcaagcactcctgcttttggtgcagcaggcgctccttcc
tttggtgcatcaagtactcctgcctttggtgcatcaagttctcctgcctttggagcatcc
agtactcctacttttggtgcatcaaatacctcatcgttcagttttggatcctccccagct
tttggccagtccacagcagcgtttggcagcaccgcatttggctctacaccatctcccttt
ggagcccaaggtgcgcaggcttcaaccccaacatttggtagttctggttttggtcaatca
cctttcggtggtggtcaacaacaagggggcagtcgagccgtgccttatgcaccgacagtt
gaggcagatacagccagtggtacgcctgctggaaagttggaatctatttctgccatgccg
gcatacaaagataaaagccatgaggagctaaggtgggaagactaccagcggggagataaa
ggtggaccacgtcctaccggtcagtctcctggaaataccggatttggtatatcagctgct
cagccaaatccttttgctccatcaccggcgtttggtcagacaccagcaaatccaacaaac
cccttttcgagctcaacatctaccaacccctttgcccctcaaaccccagcaattgccagt
tcgggttttggagcggctacttcaacttttggttcctcgccctttggtgtaacatcttca
tccaatctttttgggtcaaccccagcagctaccacatccgtttttggatcatcctccgct
tttggaacgacgacatcatcaccgttatttggttcgtcaagcactcctggatttggctct
tctccatcaatatttggttcagcttcaggtcagggggcaacttcagcatttggaaacact
cagtcagctagtctgtttagctcaaacccctcgatgccgactggttctgcatttgggcag
actggttctgcatttgggcagactggttctgcatttggacagttcggacagagtagtgct
cctgcattcggccaaactaacatgttcaataagccttctactgggtttggcaacatgttt
tcaagttcttcaacactaaccacgtctagcagctctccatttggacaaacaacgcctgct
ggtatgacaccttttcaatcatctcagccaggccaagcgtcaaatggttttggtttcaac
aacttcggccaaacaccagcagctaatgcaactgggactgctggtggaatgggatttttt
ggtcaaggcaacttcggacaaacgcctgctccgccaagctctgttgttttgcaaccggtt
gctgttacaaatccatttggaacacttcctgctatgcctcagatttcaataaatcaaagt
ggaaactcagcttcgattcaatatggaatctccagtttgcctgttgttgacaaacctgtt
tctgttagagtatcatctctcctgacttctcgacaccttttacaaaggcgggtgagattg
ccagcgagaaagtaccgtcctgacgacaatggtcctaaggttccatttttcactgatgac
gaggagaccccctcaagtacaccaaaggcggatgctcttttcattccaagggagaaccct
cgagctctagttatacgcccagctcaacagtggtcttcaaggggcaaatcaacaattcca
aaggagcgtccgactgctccagtacatgaaaatgggaagagttcagacatagctactgat
gccgcaaaccatgacaaaaatggtaaaagagaaattggttctactgaagaaagcactcat
ccatcagccaacggaaatcagaaatcaaacggcacaacaagcacagatcatgctgtggag
aaagatcgtccctacagaacactaggcggaaacagagccggggaagccgcaacagatatc
gaggcgctaatgccaaagctgcgtcaatccgattatttcaccgagccacgaatcccagaa
ctagcggctaaagaaagagcagatcctggttattgcagtcgagttaaagacttcgtggtg
ggacgccacggttatgggagcataaagttcatgggagagacggatgttcgtagactcgac
ttggaatctctggttcagttcaacaaccgggaagtgattgtctacctagacgagagcaag
aaaccggcggttggggaagggctgaacaaaccggctgaggtaacactgctgaatataaaa
tgtgttgataagaagacagggaagcagtttactgaaggagagagagttgataagtataag
atgatgcttaagaggaaagctgaggcacaaggagccgagtttgtgtcgtttgatcccgtt
aaaggcgagtggaagttccgcgtcgatcattttagttcctataagctcgacgaggaagat
gatgatgaggcttag
DBGET
integrated database retrieval system
