Brassica napus (rape): 106363165
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Entry
106363165 CDS
T04128
Name
(RefSeq) putative CCR4-associated factor 1 homolog 4
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106363165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106363165
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106363165
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106363165
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Plexin_cytopl
ParM_N
Moulting_cycle
Motif
Other DBs
NCBI-GeneID:
106363165
NCBI-ProteinID:
XP_048596433
LinkDB
All DBs
Position
A9:25826147..25826830
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AA seq
227 aa
AA seq
DB search
MEEFFKEFGQILKDVDNKLKWVSFDGSYDLAYLVQGLTGRKPLPETLEAFNKTVEETLGL
TFDVKKIAVDCKGVSARYGLQRIADDLHIKRVGDAHHAGSDSELTARVFTDLIFSISKEQ
KRELEEEKQNEERVRRAMHIMHESEQKRKREEEEETEERMKRAMHIMHEAEEAFVMERRG
YVTVQPRCGYLPVLHPPPRPVVFHPYPPQFAGYFVQPQRHIHPLFLH
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtttttcaaagagttcggtcagattctcaaagacgtggacaacaagttgaag
tgggtttcgttcgacggttcgtacgacttagcgtatctggttcaaggcctgaccggaaga
aaaccactgcccgagactttagaagcttttaacaaaaccgttgaggaaactctagggctt
acttttgatgtcaagaagattgcggttgattgcaaaggtgtgtctgcccgttacggtttg
cagagaatagcagacgatcttcacatcaaacgtgtgggtgatgcgcaccatgccggttcc
gacagcgagctcactgcccgagtgtttactgacttgatattcagcatatcgaaggagcaa
aagagagagcttgaagaggagaaacagaatgaagagcgtgtgagacgtgctatgcatatt
atgcacgaatcggaacaaaagagaaagcgtgaagaggaggaagagactgaagagcgtatg
aaacgcgctatgcatattatgcacgaagctgaagaagcttttgtgatggaaagacgtggt
tatgtgacggtacagccaagatgtggttacttaccggtactgcatccaccaccaagaccg
gttgtgttccatccttacccaccacagtttgctggctactttgtacagccacagcgacac
attcatccattgtttttacattaa
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