Brassica napus (rape): 106363972
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Entry
106363972 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106363972
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106363972
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106363972
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF2786
Motif
Other DBs
NCBI-GeneID:
106363972
NCBI-ProteinID:
XP_013659074
UniProt:
A0A816VIM4
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Position
C8:complement(42389205..42394248)
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AA seq
733 aa
AA seq
DB search
MEFKRDNTVRFYGEEKQTLEATEKRQPLPMLKPSTTQFLKPELVIPKKTNKTRLFKLPRF
GGLKVFPENFEIERDKILDPGGDVVLQWNRVFLFWCLVALYVDPLFFFLSSVKNTGRSSC
MTTDLKLGIVVTFFRTLADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYLR
SDLIVDLIACLPLPQIVSWFILPSIRSSHSDHTTNALVLIVLVQYIPRLYLIFPLSAEII
KATGVVTTTAWAGAAYNLLQYMLASHILGAAWYLLSIERQATCWKAECHNELGPIRCVTD
FFDCGTVNREDRNNWQNVTVVFSNCDPSNKIRFTFGIFADALTKNVVSSPFLEKYLYCLW
FGLQQLSSYGQNLDTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLEEWRLK
RRDTEEWMGHRQLPQNLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRHLCLDL
VRRVPLFAQMDDQLLDAICERLVSSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTNGGR
TGFFNSITLKPGEFCGEELLAWALLPKSKVNLPSSTRTVRALEEVEAFALQAEDLKFVAN
QFRRLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRRMLAKSLSLAESYSSYEEEEAL
ATAAAEEIMSQQEERQSSTPSRHHTSIGKPHFAATVLASRFAKNTRRASRKIKDVDVPML
PKPEEPDFSVDAD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaaaagagacaatactgtcagattctatggagaagagaagcaaaccctagaa
gcaacagagaagcgtcagccattaccaatgttaaaaccgtcaacaactcaatttctaaaa
ccagagttagtaatcccaaagaagactaacaaaacccgtctcttcaaactcccaagattc
ggtggactcaaagtgttcccggagaacttcgagatcgagagagacaagattctcgatcct
ggcggtgacgtagtgcttcaatggaacagagttttcctcttctggtgtctcgtcgctctt
tacgtcgaccctttgttcttcttcctgtcttcagtcaaaaacaccggtcggtcctcttgt
atgaccacagatttgaaactcggaatcgtcgttactttcttcagaacactagcggatctc
ttctacgtcttgcacattgtcatcaagttcagaacagcttacgtctctcgtacttcgaga
gtgtttggtcgtggagagcttgtgaaagatccaaagctgattgctagaagatacttgaga
tcagatctcatcgttgatctcatcgcttgtttgcctcttcctcagattgttagttggttt
atcttgccatcaatcagaagctctcactcagaccataccacaaatgcacttgtcctcatt
gttctagttcagtacattcctaggctttatcttattttccctctaagcgctgagattatc
aaagcgaccggagttgttacaaccaccgcttgggccggtgctgcttacaaccttcttcag
tatatgctcgctagtcatattcttggtgcggcatggtatctactgtcgatagagcgtcaa
gcaacgtgttggaaagcagaatgtcataacgaattaggcccaatacgatgtgttactgat
ttctttgactgtggtacagtgaaccgagaggataggaataactggcagaatgttactgtt
gtcttcagcaactgcgatccttcaaacaagatacggttcactttcggcattttcgcagat
gctctcaccaaaaatgtagtctcatctcccttcttggagaaatatttgtattgcctatgg
tttggtttgcagcaactaagttcttacggacagaatcttgacacaagtacatctgttcta
gagacaatgtttgctatcctcgtggctatctttggtctggttttgtttgctcttttaatc
ggaaacatgcagacgtatttgcaatcgatcacggtgaggctagaggagtggagattgaag
agaagagacacagaagaatggatgggacatcgtcaactacctcagaacttaagagagaga
gtgagacgttttgttcagtacaaatggttagccactagaggagttgatgaagagaccatt
cttcattcgttacctgctgatcttcgaagagacatccaacgacatctctgtctcgacctt
gttcgtcgtgtaccgctatttgcgcaaatggatgatcagttactagacgcgatatgcgaa
cggttagtgtcatctctaagcacgcaagggaactacattgtacgtgaaggcgatccagtg
accgaaatgctcttcatcatccgtggaaagctcgaaagctcgacgactaatggaggcagg
acaggattcttcaactcaatcacactcaaaccaggagagttctgcggagaagagcttctc
gcttgggcgctacttccaaaatcaaaagtcaacctaccatcatctacgagaacggtgcga
gctctagaagaagtcgaagcctttgctttacaagcagaggatctcaagtttgtggctaac
cagttcagacgtttacatagcaagaagctgcaacacacattccgttactactctcaccag
tggagaacatgggctgcttgcttcgtgcaagtggcttggagacggtataagaggagaatg
ctggctaagagtcttagcttggctgagtcatactcttcttatgaagaagaagaagctctt
gcgacagctgcggccgaggagataatgagtcaacaagaagagagacagagcagtactccg
tcgcgccatcatacttctattgggaaaccgcattttgctgcaacggtacttgcttcgagg
tttgctaagaacacgaggagggcttctcgtaagataaaggacgttgatgtacccatgctt
cctaaaccggaagaaccggatttctctgtggatgcagattaa
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