Brassica napus (rape): 106364018
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Entry
106364018 CDS
T04128
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5-like
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106364018
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
106364018
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Other ribosome biogenesis factors
106364018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Ubie_methyltran
Methyltransf_31
FtsJ
Methyltransf_4
PCMT
Motif
Other DBs
NCBI-GeneID:
106364018
NCBI-ProteinID:
XP_013659119
LinkDB
All DBs
Position
A9:complement(3470137..3473024)
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AA seq
484 aa
AA seq
DB search
MARRKPNAPPKATRQPAKQKFSSAERSSLYASREAAKVLGTVLRGDSERRAVASIKSLVF
SPSVRNKRGTFALVCETLKHLTVIKEVLEIANVLNSKWKRQEPLVYIICYDILFGKEPPL
IGDAEKFLMKRKDALVSSLATLLVRKKAETVDELLGVSQVNGPLKPRYVRVNTLKMDVDS
AVQELGKLYKVQKDETVPDLLVMPPGSDLHSHHLVKNGRIFLQGKGSAMVAAALEPEADW
EVIDACAAPGNKTINLAALMKGQGKIIACELNEERVKRLEQTIKLSGATNIEVFHGDFLG
LAPEDPSFAKVRAILLDPSCSGSGTITDRLDHLLPSHSADNKNYDSIRLHKLAVFQKKAL
AHALSFPQVERVVYSTCSIHQIENEDVVSSVLPLASSLGFELGTPFPQWQRRGLPVLAGS
EHLLRMDPEEDKEGFFIALFTKTNKLDDLKSSEVSERECRRRRRQGHPFLWPKVFFRAWN
GRMR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgcaaacccaacgcgccgccgaaagccacgcgccagccggccaaacaaaag
ttctccagcgccgagagatcatctctgtacgcatcgagggaagcagctaaggtcctcggc
acagttctccgaggagactccgagcgtcgagccgtcgcttcgataaagtcactcgtcttc
agcccttccgtccgcaacaaacgcggcaccttcgctctcgtctgtgagaccctcaaacat
cttactgtaataaaagaagttcttgaaatcgctaacgtgttgaatagcaaatggaagagg
caagagccattggtctacattatttgctatgatatccttttcggaaaggagcctccattg
attggtgatgctgagaagtttctcatgaaacgtaaagatgctctagtgtcaagtctagct
acacttttagtgaggaagaaagctgaaaccgttgatgagttgttgggtgtttctcaagtt
aatggtcctttgaaaccacgttatgttcgcgtaaatacactcaagatggatgtagattca
gccgtgcaggagctggggaagctctataaggtgcagaaggatgagacagttcctgacctg
ttggtgatgcctcctggcagcgatttgcattctcatcatttggttaagaatgggcgtata
tttttgcagggaaagggaagtgcaatggtagcagcagcactagagccagaagcagattgg
gaggttattgatgcatgtgcagctccaggaaacaaaactattaatcttgctgctcttatg
aaaggacaaggaaaaatcatagcgtgtgagctaaatgaagaacgtgtaaagcgtttggaa
cagactattaagctctctggtgctaccaatattgaagtctttcatggtgatttcttggga
ctagctccggaagatccttcttttgcaaaggttcgggctatattgttggatccttcttgc
tctggctcaggaaccattacagatcgtttggaccatcttctcccttctcattcagcagat
aacaagaactatgactccataagactacacaaactcgctgttttccagaagaaggctctt
gctcatgcactctcctttccacaggttgagagagtagtatacagcacatgctccatccac
cagatagaaaacgaagatgttgtctcatctgttttacctttagcttcatccttgggcttc
gaactcggtactcctttccctcagtggcagcgtcgtggtctccctgtattagctggatct
gagcatttactcaggatggatccagaggaggacaaagaagggttcttcatcgctttgttc
accaagacaaacaaactcgatgacttgaaatcgtctgaagtttctgaaagagagtgtaga
agaagacgcagacagggtcatccgtttctttggcctaaagtgttcttcagagcttggaat
gggcggatgaggtag
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