KEGG   Brassica napus (rape): 106364465
Entry
106364465         CDS       T04128                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 2
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
bna  Brassica napus (rape)
Pathway
bna04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106364465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106364465
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bna04147]
    106364465
Membrane trafficking [BR:bna04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    106364465
Exosome [BR:bna04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106364465
  Exosomal proteins of other body fluids (saliva and urine)
   106364465
  Exosomal proteins of colorectal cancer cells
   106364465
  Exosomal proteins of bladder cancer cells
   106364465
SSDB
Motif
Pfam: VPS28 DUF7784
Other DBs
NCBI-GeneID: 106364465
NCBI-ProteinID: XP_013659488
UniProt: A0A078FUY4
LinkDB
Position
A9:complement(16793491..16794694)
AA seq 212 aa
MMMMEAKLWNDKREREMYDNFAELFAIIKATEKLERAYIRDLISPSEYESECNKLILHFK
TLSASLRDTVPSIQRFADTYKMDCPSALYRLVTSGVPATVEHRATVAASTSNSASIVAEC
VQNFITAMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKTKMKEWLSRLAKMGA
ADELTEQQSRQLHFDLESSYNSFMAALPKGGS
NT seq 639 nt   +upstreamnt  +downstreamnt
atgatgatgatggaggccaagttatggaacgacaagagagaaagagagatgtacgacaac
ttcgcagagctctttgcaatcatcaaagcaacagagaagctcgagagagcttacatcaga
gacttaatctctccttcagagtacgaatccgaatgcaacaaactcatcctccacttcaag
acgctctccgcttccctcagagacacggtcccaagcatccaacgattcgcagacacatac
aaaatggactgtccatccgctctctaccgcctcgtgacatccggtgttcccgccaccgtg
gaacaccgagccaccgtggcggcatccacctccaattctgcctccattgtcgctgagtgt
gtgcagaacttcatcacggcgatggattctttgaaactaaacatggttgctgtcgaccag
gtctatcctctcttgtctgatctatctgcttctctcaacaaactgagtattctgccgccg
gatttcgaagggaagacgaagatgaaagaatggctttcgaggttggcgaagatgggtgca
gctgatgagcttacggaacagcagtcgaggcaacttcactttgatcttgagtcttcttac
aactctttcatggcagctttgcctaaaggtggtagctga

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