Brassica napus (rape): 106365102
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Entry
106365102 CDS
T04128
Name
(RefSeq) exosome complex component RRP41 homolog
KO
K11600
exosome complex component RRP41
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106365102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106365102
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106365102
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
106365102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106365102
NCBI-ProteinID:
XP_013660009
UniProt:
A0ABQ8C643
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Position
A9:complement(37540511..37542473)
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AA seq
240 aa
AA seq
DB search
MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSRADGSAVFEMGNTKVIAAVYGPREIQNKSQ
QKNGHALVLCEYSMAHFSTGDRRRQKNDRRSTELSLVIRQTMEACILTELLPHSQIDIFL
QVLQADGGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGADV
TVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRRAA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgtaaaccctgaaggtcttagattagatggtcgccgattcaatgagatgagg
caaatcgtagctgaagttggagtggtttccagggctgacggctctgctgttttcgagatg
ggtaataccaaagtaattgcagctgtttatggccctagagagattcagaacaagagccaa
caaaagaatggtcatgcattggtgctgtgtgagtatagtatggctcattttagtactggt
gatcgtaggagacagaaaaacgacaggcgatcaacagagttatctcttgtcatccgtcag
acaatggaagcttgcatattaaccgaactgttgcctcattctcagattgacatcttcctt
caagttctacaagctgatggaggaacaagatcagcttgtatcaatgctgccactctagct
cttgcagacgctggaataccgatgcgcgatcttgctgtttcctgcagtgctggatacttg
aacagtactccacttcttgatcttaactatgtcgaagatagcgccggaggagctgatgtt
accgtaggcattctacctaaactagacaaagtgacactccttcagatggatgcaaagtta
ccgatggaaacatttgaaactgtgtttgcattggcttctgaaggctgcaaggcgattgct
gaaagagtacgcgaggtacttcaagaaaacaccaaacagctagagtatcgtcgtgctgca
taa
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