Brassica napus (rape): 106365191
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Entry
106365191 CDS
T04128
Name
(RefSeq) crossover junction endonuclease EME1B-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106365191
03460 Fanconi anemia pathway
106365191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106365191
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106365191
BRITE hierarchy
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GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
MobL
DUF6387
Motif
Other DBs
NCBI-GeneID:
106365191
NCBI-ProteinID:
XP_013660095
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Position
A9:39675420..39679070
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AA seq
523 aa
AA seq
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MEDHILISDGEDPATPLPSLSKRPRKDPISAILISDSDPTPFKQQPESSSTPLFVPDTPL
SDEFSLVKCSFASNREDKFSGKRVISLDSEFEDSPGPVLADIGLDSGSSVADSAEITQPS
FGDNISWMHEVSVRTSLTNDTIEVDSEQEKENISIENMGRKKQIRSCKSRIITGGELPKK
QLSREEKIRAMEEKKLRKEEEKLQKAIEAERKKLEKEKQKWEKGKLALKSIVAEIDTKVV
EGSIGGLLLSRFSEKGISFRVAPNPIERSIVWTMTIPEDIALAFPEGPTICYVVLVYEAE
EFCNLVADEKFLENITRVQDRYPSYTVCCLTNKLMSYVKKREKEEYKNPGSWRRPPIDEV
LAKLTTHYVRVHSRDCVDEAEVAEHVVGLTTSLASCQFRKKLTMLSVNANGALVSKDSVD
KHLIKKSPWLKALVAIPKVQPRYAVAVWKKYPSMKSLLKVYMDPSISIHEKEFLLKDLKV
EGLVGGDIRLGEVCSKRIYRVLMSPSGTIKTDDVENGAAFFTH
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcacattcttatctccgacggggaagatccggccactccactcccatcactc
tcgaaacggcctcgaaaagatccgatctccgcgattctgatatccgattccgatccgacg
ccgttcaagcaacagccggaatcttcttccactcctttgttcgtccctgatacacctctc
tccgatgaattctctctcgtcaaatgctcctttgcttcaaaccgagaagataaattctct
gggaaacgagtgatatctctggattcagagtttgaggatagtcctggacccgtgcttgct
gatattgggttggattctggatcaagtgttgcagattctgctgaaataactcagccaagt
tttggggataatattagttggatgcatgaagtcagtgtgcgcacttcactgaccaatgat
actatcgaggttgattctgagcaagagaaagaaaatataagcattgagaatatgggtcga
aaaaagcagatcagaagttgtaagagtaggattattacgggtggagaattgcccaaaaag
cagctgtcgagagaagaaaaaatccgtgcaatggaggaaaagaagttaagaaaagaggaa
gagaagttacagaaagctattgaagctgagcgtaaaaagttagagaaagaaaagcagaag
tgggaaaagggaaagttagctctgaaatctatcgttgctgagattgataccaaagtagtc
gaaggatccattggaggacttctactttcaaggttctctgagaaaggcatttcattccgt
gtagcccctaatcctattgagagatccattgtctggacgatgacaattccagaggatatt
gctctggctttcccagaagggccaacgatttgttatgtcgtactagtgtatgaggctgaa
gaattttgtaaccttgttgctgatgaaaaatttctagaaaacatcacaagagttcaggac
cgatacccatcttatacggtgtgctgtctcaccaataagttaatgtcttatgtaaagaaa
agggaaaaggaagagtacaagaacccgggaagctggagacggcctcccatcgatgaggta
cttgcaaaattaactactcactatgtaagagtacattccagagactgtgtagacgaggct
gaggtcgctgaacatgtagttgggttaactaccagtctggcttcttgtcagttcaggaag
aaactaactatgttatcagtaaacgctaatggtgcattagtctccaaggattcagttgac
aaacacttgattaaaaagagtccatggttaaaagcgttagtggcaataccaaaggtgcag
ccaagatacgcggtagcagtgtggaagaaatatccatctatgaagtctcttcttaaggtt
tatatggaccctagcatatcgattcatgagaaggagtttctactgaaagacttgaaagta
gaaggtttagtaggaggagatataaggttaggtgaggtttgttcaaagcggatatacaga
gttcttatgtctccaagtggaaccattaagactgatgatgttgaaaacggtgctgctttt
ttcacacattag
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