KEGG   Brassica napus (rape): 106365347
Entry
106365347         CDS       T04128                                 
Name
(RefSeq) sm-like protein LSM1A
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
bna  Brassica napus (rape)
Pathway
bna03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106365347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106365347
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106365347
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106365347
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 106365347
NCBI-ProteinID: XP_013660248
UniProt: A0ABQ8C960 A0A078G5D7
LinkDB
Position
A9:complement(40477125..40478072)
AA seq 128 aa
MSWAAPDDIFFSTSLAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVIEEAYERVIVGDL
YCDIPLGLYIIRGENVVLIGELDVEKEELPAQMVQVSEAEIKRAQKAEKEEMLLKGLMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggctgctcctgatgatatcttcttctccacttctctcgccgcctacttagac
aagaagcttcttgtcttgcttcgtgatggtcggaaactgatgggtctacttcggtccttt
gatcaatttgcaaatgctgttatagaagaagcttatgaaagagtcatcgtgggtgatctc
tactgtgatattcccttaggtctttacataatccgtggagagaatgttgtcttgattggt
gaactggacgttgaaaaggaagagcttcctgctcaaatggtccaagtctcagaagcagag
atcaaaagggctcagaaagcagagaaagaagaaatgctactgaagggtttgatgcggaaa
agaatggagttccttgatctcgattag

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