Brassica napus (rape): 106365414
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Entry
106365414 CDS
T04128
Name
(RefSeq) zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106365414
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106365414
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-met
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
106365414
NCBI-ProteinID:
XP_013660301
UniProt:
A0ABQ8C999
A0A078H546
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Position
A9:44397062..44402176
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AA seq
490 aa
AA seq
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MTAEEHTISSSGGYVQNLSATDHVDHRHEHEPFNPPLAKKKRNLPGNPDPEAEVIALSPK
TLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHN
PTRALGDLTGIKKHFCRKHGEKKWKCGKCSKRYAVQSDWKAHSKTCGTREYRCDCGTIFS
RRDSFITHRAFCDALAEETARLNAASHLKSPTGNNLNYHYLMGTLIPSPQPPPSFPFGAP
QPQHHHHPFPITTTTFDQHHHQDSMQPASSLSLWMGGNVNHHQVTNEDCTQPQSPQEDYN
WVFGNANNSGELSDSLITRENINMAAHNENANAVTSLSVPSLFSNVDQMRQDANVAVANM
SATALLQKAAQMGVTSSTPTTTSDQSAFLQSFKSKISDQSPNVEDGGSDKFFALFGSNSV
GLMSNNGLGHEIVNPRNGVTVVTGIDELQNYPLKRRRVENGDALGGGQTRDFLGVGVQTM
CRSSSINGWI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaagaacatacaatctctagtagtggaggatatgtccaaaacttatcagca
actgatcatgtcgatcatcgtcatgaacatgaaccctttaatcctcctcttgccaagaag
aagagaaacctccctggaaaccctgatccagaagctgaagtcatagctctatctccaaaa
acacttatggccacaaaccgtttcctctgcgaaatatgtggaaagggttttcaaagagac
cagaatctacagcttcaccgtcgaggtcacaacctcccatggaagctaaagcagaggaca
agtaaagaagtaaggaaacgagtgtatgtgtgtccggagaagagctgcgtccatcacaat
ccgacaagggcacttggtgaccttacaggaatcaagaaacatttttgtcgcaaacatggc
gagaagaagtggaagtgtggcaaatgctccaagagatatgcagtccaatctgattggaaa
gctcattcaaagacttgtgggactagagagtatagatgtgactgtggtactattttctcc
aggagagacagcttcataacacatagagcgttttgcgacgccttagcagaagaaactgct
aggctaaacgcagcttctcatctcaaaagccccaccggtaataatcttaattaccattat
cttatgggcacactcatcccatcaccacaaccaccaccgtcgtttccatttggagcaccg
caaccgcaacatcaccaccacccttttcccatcacaaccaccacctttgatcagcatcat
catcaagactccatgcaacctgcttcttcactctctctatggatgggaggaaatgttaat
catcatcaagtgaccaacgaggactgtacgcagccgcagtcaccgcaggaggattataac
tgggtttttgggaacgcaaataatagcggcgagttaagcgattcactcatcacacgtgaa
aatatcaatatggctgcccataatgaaaacgcaaacgcggttacttctctttccgtgcct
tctctttttagcaacgtcgaccaaatgagacaagacgcaaacgtagcggtcgcaaatatg
tcggcaactgcgttacttcaaaaagcggctcaaatgggcgtcacttcttctactccgacc
accaccagcgaccagtcagcgtttcttcagagttttaagtcgaaaatctccgaccagagt
ccgaatgtagaagatggtggcagtgacaagttcttcgcattgtttggatcgaacagtgtc
ggcttaatgagtaacaatggtcttggtcacgagatcgtgaaccctagaaatggcgttacg
gtcgttacggggattgatgaattacagaattaccctttgaagcgtagaagagttgagaat
ggggatgcattaggaggagggcaaactcgagatttccttggagttggtgtacaaacaatg
tgtcgttcatcttctatcaacggatggatttaa
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