Brassica napus (rape): 106365558
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Entry
106365558 CDS
T04128
Name
(RefSeq) solanesyl diphosphate synthase 2, chloroplastic
KO
K05356
all-trans-nonaprenyl-diphosphate synthase [EC:
2.5.1.84
2.5.1.85
]
Organism
bna
Brassica napus (rape)
Pathway
bna00900
Terpenoid backbone biosynthesis
bna01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106365558
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bna01006
]
106365558
Enzymes [BR:
bna01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.84 all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
106365558
2.5.1.85 all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
106365558
Prenyltransferases [BR:
bna01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106365558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Urm1
ELYS
Motif
Other DBs
NCBI-GeneID:
106365558
NCBI-ProteinID:
XP_013660438
UniProt:
A0A078HRU1
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All DBs
Position
C5:8858393..8860701
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AA seq
420 aa
AA seq
DB search
MMMSCRNIDLGTSVLDLMPCGCSSPTSRRIFFGNCSKTVCSIGRRSYGAGNLVFLRRDSG
SCRAIPAKPKESALVNGLGEDKTVMINLRQESRKPISLESLFEVVADDLQSLNDNLLSIV
GAENPVLISAAEQIFSAGGKRMRPGLVFLVSQATAELAGLKELTVEHRRLAEIIEMIHTA
SLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQVI
KDFASGEIKQASSLFDCDVKLDDYLLKSYYKTASLVAASTKGAAIFSSVESKVAEQMYQF
GKNLGLSFQVVDDILDFTQSSEQLGKPAANDLAKGNITAPVIFALENEPRLREIIESEFC
EPGSLEEAIEMVRSGGGIKRAQELAKEKAELALKNLNCLPRSGFRSALEDMVMFNLERID
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtcttgtcggaatatagacttgggtacgagtgttcttgatctgatgccatgc
gggtgctcttctcctacaagtcgtcgaatcttctttgggaactgttcgaagactgtttgt
agtattggtagaagaagctacggtgctggaaacttggtatttctccggcgagattcaggg
agctgcagagcgattccggcgaaacccaaggagagtgctctggtcaatggtctcggtgaa
gataaaacagtgatgatcaatctgaggcaagagtcacgaaagccaatatctttggagagt
ctgtttgaagtagtggctgatgatctacagagtttgaacgacaatcttctctcgattgtt
ggtgcagaaaacccggttctgatatctgcggctgagcaaatattcagtgctggtggtaag
agaatgagacccggtttggtcttcctcgtatcacaagccactgcggaactagctggctta
aaggagcttacggtagagcatcggcgtttagctgagatcattgagatgattcataccgca
agtttaatacacgacgatgtcttagacgaaagtgatatgagaagaggaaaggaaactgtt
cacgagctctttggaacaagagtagctgtgctagctggtgatttcatgtttgctcaagca
tcatggtacttggctaatcttgagaacctagaagtcattaagctcataagtcaggtgatc
aaagactttgcaagcggtgagataaagcaagcatcgagtttattcgactgtgacgtcaag
ctcgatgactacttactcaagagttactacaagacagcttcattagtagctgcaagcacc
aaaggagctgcaatattcagtagcgtcgaaagcaaagtagcagagcaaatgtatcagttc
gggaaaaatcttggattatctttccaagtagttgatgacattttggacttcactcaatcc
tcagagcagctagggaagcctgcagcaaatgatttggccaaaggtaacataacggcgcca
gtgattttcgccctagagaatgagccgaggctaagagagatcattgagtctgagttttgc
gagcctggatcgcttgaagaagcgattgaaatggttagaagtggtggtgggatcaagaga
gctcaagaattggccaaggagaaagcagaacttgctttgaagaacttgaattgtcttcct
agaagtggtttcagatcagctctggaggatatggtgatgtttaatcttgaaaggattgat
tag
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