Brassica napus (rape): 106365967
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Entry
106365967 CDS
T04128
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106365967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106365967
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106365967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
106365967
NCBI-ProteinID:
XP_013660943
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All DBs
Position
A9:complement(39821691..39825129)
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AA seq
760 aa
AA seq
DB search
MAEFAELEAQDGVRMPWNIIPVATTKDQPIDSEIPVSAIYTPLAPSTPLLPYAPLRCRTC
RSVLNPYSVVDFSASTWGCPFCFNRNPFPSNYSSISDTNLPPELFPNSTTVEYLSSSSSS
SSPPPVFLFVVDTCLFSDELDFLRSSLFQAVDLIPDASVVGLIAFDSLVRVYELGFPHCT
KSYFFHGNKDCSKDQLLDQLSFFVKSPKPSSGVIAGVRDGLSAEDIARFLPPASDCQFTL
HSVLEELGSSQWPAAPDHRPGRCTGVALRIAACLLGACFPGSAARIMAFIGGPSTLGPGA
IVSPELSEPIRSHKDIGKDSAPCYQEAVEFYEKLAKQLVHQGHVLDVFASSVDQVGIAEM
KVAVEQTGGFVVLAESFGHSVFRDSLKRVFQSGENDLGLSSCGIFEINCSKGVKVQGIIG
SCASLEKKGPLCSDTGIGQGHTSAWKMCGLDKSTSVCLVFEIAKRETADVVLQSQINQFY
FQFLTYYQHSNGQTRLRVTTLSRRWVMGTENLQELTNGFDQEAAAVVMARLISFKMETQP
EFNPQRWADKALVNLCSRFGEYQKGNASSFNLPSQLSNFPQFVFHLRRSQFVQVFNNSPD
ETAYFRMILNRENVSNSIVMIQPSLVSFTFNSQPEPIPLDVASIAADRILLLDAYFTLVI
FHGATIAQWRKAGYHHQPEHQALVHLLQSPRDYSDTIINERFPIPRLVICDQYGSQARFL
LAKLNPSSDGNGPFSGGSNVFTDDVSLSVFLDHLRRLIVH
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttcgcagagctcgaagctcaagatggcgttagaatgccatggaacatcatc
cccgtcgcaaccaccaaggaccaacccatcgactccgagatcccagtttccgccatctac
acacctctcgccccctccacccctctcctcccttacgctcccctccgctgccgcacctgc
cgctccgtcttaaacccttactccgtcgtcgacttctccgcctccacatggggctgccct
ttctgcttcaatcgcaaccccttcccgtcaaactactcctcgatctccgacaccaatctc
cccccggagctcttccctaactctacaaccgtcgagtatctctcctcctcctcctcatcc
tcctctccccctcccgtcttcctcttcgtcgttgacacttgcctcttctccgacgaactc
gatttcctcagatcgtctctcttccaagctgtcgatctcatccccgacgcctccgtcgtc
ggactcatcgccttcgattcgttggtccgcgtctacgagctcgggttccctcactgcacc
aaatcttacttcttccatggaaacaaagactgttccaaagatcagctccttgatcagctc
tctttcttcgtcaagagccctaaaccttcttccggcgtcatcgccggcgttcgtgacggt
ctctccgccgaagatattgctcggtttctcccaccggcctccgattgccagtttactctc
cactccgttcttgaggagcttggaagcagccagtggccggctgcacctgatcaccgccct
gggaggtgcactggtgtggcgcttcgtatagctgcttgtctcttaggagcttgctttcct
ggctctgctgctagaatcatggcttttattggtgggccttccactctaggccctggagcc
attgtttctccagagctttcggaaccaatccgttctcataaggacattggtaaagattct
gctccgtgttatcaagaagctgttgagttctatgagaagctcgcgaaacaacttgttcat
caaggccatgttcttgatgttttcgcgagttctgttgatcaggttggcatagctgagatg
aaagttgcagttgagcagactggtgggtttgtggtgcttgctgaaagttttggccattcg
gtatttagggattctctcaagcgggtgtttcagtcaggtgaaaatgatctaggcttgtcc
tcatgtggtatatttgaaattaactgctcaaagggtgtcaaagttcagggaatcattggc
tcttgtgcatctctcgagaagaaaggaccattatgctctgacactggcatcggtcagggc
cacacaagcgcgtggaagatgtgtggccttgataaaagtacttccgtatgtttagttttc
gagattgctaaaagggagacagctgatgtcgttctgcagtcgcagatcaatcagttctac
ttccagtttttaacatattatcagcactcaaatggtcaaacgaggctccgggttacaact
ctttcaagaagatgggtcatgggaactgaaaacttacaggagttaacaaatggatttgac
caagaagcagctgctgtagttatggcacgacttatttctttcaaaatggagactcagcct
gagtttaatccccaacggtgggcggacaaagctttagtaaatctatgctcccggtttgga
gagtaccaaaagggcaatgcttcttcatttaacctaccttctcagttatcaaacttccct
cagtttgtgtttcacttgcgccgatctcagtttgttcaggtctttaacaacagcccagac
gagacagcatattttcgaatgatattgaaccgagagaacgtttcgaattcaatcgtgatg
attcaaccttcgctggtttctttcacattcaattcacagccagaaccaattcctcttgat
gtggcatccattgcagctgatagaatcctacttctggatgcgtacttcacactcgtaata
tttcacggtgctacaatcgctcaatggagaaaagctggataccatcatcaacctgaacac
caggcacttgtgcatctgttgcagtctcctcgagactattcagatacaataataaacgaa
aggtttcccattccgcgtcttgtcatatgcgatcaatatggttcacaggctcgttttcta
ctagcaaaactaaatccttcatcagatggaaatggtcctttttccggagggagtaatgta
ttcacagatgatgttagcttgtctgtttttcttgatcatcttcgaagactcattgttcat
tag
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