Brassica napus (rape): 106366017
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Entry
106366017 CDS
T04128
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106366017
Transcription machinery [BR:
bna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
106366017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Response_reg_2
GerE
Sigma70_r4_2
HTH_11
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
106366017
NCBI-ProteinID:
XP_013661013
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All DBs
Position
A9:3885628..3889040
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AA seq
501 aa
AA seq
DB search
MGVVFISSSAARSPLGLSTDLLTHRSSLKKLPSIVAFKADESTNSSLIVPREQEKHKEKR
VVTKRKPSKDQNLPPLGLDYNEAAARLESIYKLSPPATSVEEDVIDASKGKVSRRRKRKE
SGGGEEKKVVVRSNVKKEKRLNLDKRIALKRNVQEKPVIIASAKKKVTRRQQEEEKIERL
VRDYSASNDVVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKALLEVKDELQKSLGKEPREA
EIAREINMSVAEVKKKIKVGKAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGM
KGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKAKMEL
LFELGRLPTEEEVVERLKISPERYREVLRAAKPVYSLNTKHSVTQEEFINGITDVDGVGA
DNRIQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE
VKALMKLKHQARVDYLRQYII
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgtttatttcaagctcagctgcaagatctcctctcgggttaagcaccgat
cttttaacacaccggtcctcactcaaaaagctgccatccatcgttgctttcaaagcagat
gagtccaccaactcatctttgatcgttcctcgtgagcaagagaagcacaaggagaagaga
gtagtaactaagagaaagccctctaaagaccagaacttgcctcctttagggttagattac
aatgaagctgctgcaagactagaaagcatttacaagcttagtcctcctgcaacatcagtg
gaagaggatgttattgatgcttctaaagggaaagtttcacggaggaggaagaggaaagag
agtggcggcggcgaagagaagaaagtagttgtgaggagtaatgtgaagaaggaaaagaga
ctgaatcttgataaacggattgcgttgaagagaaacgttcaagagaaaccagttattatt
gcctctgctaagaagaaagtaacaaggaggcagcaagaggaggagaagatcgagaggctt
gtgagagactactcggcttctaatgatgtagtcagcttggactggaagaaaatgaagata
cctcctgttctttcttccactgaacatacttggttgtttaagttgatgcaacctatgaag
gctcttcttgaagtgaaagatgaattgcaaaagagcttgggaaaagagcctagggaagct
gaaatagctagagagatcaatatgagtgtggctgaagtgaaaaagaaaatcaaagttggt
aaagctgcaaggaacaaacttattaagcacaatctccgccttgtcttgtttgttatgaac
aaatactttcaagacttcaccaacggaccaaagttccaagacctctgtcaagccggtatg
aaagggcttatcacagctattgaccggtttgaaccaaaaagaaagtttcgtctttctact
tatggtttgttttggattagacatgccatcatacggtctatgacaacctcgaacttcact
cgtgtcccatttggacttgaatcggttagagtggagatctataaagcaaagatggagcta
ttgtttgagctgggaagactccctacagaggaagaggttgttgagagactcaagatatca
cctgagagataccgtgaagtgttgagagccgcaaaaccggtttactcgctgaacacaaaa
cattcggttactcaagaagagtttatcaatggaatcacggatgttgatggtgtaggagct
gataacagaatacaacctgctcttctcaggctagctcttgacgatgtgctggattcattg
aagcctaaagagagtctagttattcgacaaagatacggtcttgatgggaaaggagacagg
acactaggagagatagctggaaatctcaacatctccagagaaatggtgaggaaacatgaa
gtcaaggccttgatgaagctcaagcatcaagctcgagttgattacctccgtcaatacatc
atctga
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