Brassica napus (rape): 106366098
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Entry
106366098 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106366098
03036 Chromosome and associated proteins [BR:
bna03036
]
106366098
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106366098
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Helicases
106366098
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
106366098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
106366098
NCBI-ProteinID:
XP_013661111
LinkDB
All DBs
Position
A9:complement(4421570..4424970)
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AA seq
654 aa
AA seq
DB search
MPSLALSDKKKEEKKMKKKIDLETTTPEQDSKKKGKKLKLSDSDGEEKKSKKKRKSIDES
EEEPEKKSSKKVKLSVVEDVKVDNPNAVSNFRISDPLKAKLKEKGIEALFPIQATTFDMV
LDGADLVGRARTGQGKTLAFVLPILESLINGPAKSKRKNGYGRPPSVLVLLPTRELAKQV
FADFEAYGGAVGLAACCVYGGDPYAPQEHKLKRGVDIVVGTPGRIKDHIERRNLDLTYLQ
FRVLDEADEMLRMGFVDDVELILGKVEDPKKVQTLLFSATLPSWVQTIAARFLKQDKKTI
DLVGNDKMKASNSVRHIALPCSKQAMSRLIPDIISLYSSGGSTIIFTETKDQASELSGLL
PGARALHGDIQQSQREITLAGFRKGKFSTLVATNVAARGLDINDVQLIIQCEPPRDVEDY
IHRSGRTGRAGNTGVAVMLYDSRKSGVSRIEKQAGIKFEHVSAPQPNDIARAVGMEAAEK
ITQVCDSVVPAFMAAAKELLESSGVSAEVLLAKALAKTAGFTEIKKRSLLSSLENHVTLL
FEAGKPIYTPSFVFGALKRILPEDKVNTIEGFTLTADGQGAVFDVAQSDVDQFMSAAQKT
ASVSLEIVKELPKLQEREPMPRGRFGRQGGQGFNNRGRGGRFGRGRGGGGGQRW
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgccttccttagctctatccgacaagaagaaagaagagaagaagatgaagaagaagata
gatttggaaaccacaaccccagagcaggactcaaagaagaaaggaaagaagctgaagctc
tcagactccgatggagaagagaagaagagtaagaagaagcgcaagtctattgacgagtcc
gaggaagagccggagaagaagagcagcaagaaggtgaagctaagtgttgttgaagatgtc
aaagtcgataaccctaacgccgtctcgaactttcgtatctctgatcccttgaaggccaag
cttaaggagaagggcatcgaagctctcttcccgattcaagctactacttttgatatggtt
cttgatggtgctgatttggtcggaagggctcgtactggtcagggtaagacattggctttc
gtgttgcctatattggagtcattgatcaatgggcctgcgaagagcaagaggaagaatggt
tacggcaggcctcctagtgttttggttcttttaccgaccagagaattggccaagcaggtg
tttgctgactttgaggcatacggaggagcagttgggctagctgcttgctgtgtctatgga
ggcgatccatacgcacctcaagagcataaactaaagagaggtgtggacattgtagttggg
acccctggtcgtatcaaggatcatattgaaaggagaaaccttgacttgacttatctacaa
ttccgtgttcttgatgaagctgatgagatgttgagaatgggattcgttgatgatgttgaa
cttatattagggaaggttgaggatcctaagaaagttcagacgcttctcttcagtgctaca
ttgccttcgtgggttcaaaccattgctgctaggtttcttaaacaagacaagaagactatt
gatcttgttggtaatgataaaatgaaggctagtaacagcgttagacacattgctcttccc
tgcagtaagcaagccatgtctcgtttgattcctgacatcatcagcttatacagcagtgga
ggtagtacaatcattttcactgagactaaagaccaagcttccgagctttctggtctcttg
cctggtgcaagagctttgcacggtgacatccaacaatcacagcgtgagattactcttgct
ggatttagaaagggcaagttctcgacgttggttgctacaaacgttgctgctcgtggtcta
gacatcaatgacgtgcagctaatcatccagtgtgagcctccacgtgatgttgaagattac
atccatcgttcaggccgaacaggaagagctggcaacactggagtagcggttatgctatac
gattctagaaagtctggagtatctaggattgagaaacaagccggtatcaaattcgagcac
gtttctgcgcctcagcctaatgatatcgccagagctgttggtatggaagctgcggagaag
atcacgcaagtctgtgacagtgtggttcctgcgtttatggctgctgccaaggaactgttg
gagagttctggtgtatcagcagaagtactccttgcaaaagctcttgcgaaaaccgcgggc
ttcactgagataaagaagaggtcacttctatcatcattggagaaccatgtcacactactt
tttgaagcagggaaacccatttacactccatcatttgtatttggtgcactaaagagaatc
ttaccagaagacaaggttaatacgattgaagggtttactctaacggcagatggacaaggt
gcggttttcgatgttgcacaatcggatgtagaccagttcatgtcagctgcgcaaaagact
gctagtgtgagcttggagattgttaaggagttgcctaagcttcaagagagagagccaatg
ccaagaggaagatttggccgccaaggtggccaagggtttaataatcgcggcagaggaggt
agatttggtcgtggtcgtggtggtggaggaggccagcgatggtga
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