Brassica napus (rape): 106366336
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Entry
106366336 CDS
T04128
Name
(RefSeq) probable alpha-mannosidase At5g66150
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
bna
Brassica napus (rape)
Pathway
bna00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
106366336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106366336
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
106366336
Membrane trafficking [BR:
bna04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
106366336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Glyco_hydro_57
DUF4815
Motif
Other DBs
NCBI-GeneID:
106366336
NCBI-ProteinID:
XP_013661387
LinkDB
All DBs
Position
A9:5686536..5692517
Genome browser
AA seq
1032 aa
AA seq
DB search
MVIPGLSLLICVIVSVTTCLSFKSVNGVYVKYGTEARVVPDKLNVHLVPHSHDDVGWLKT
VDQYFIGSNNSIQKACVRNVMDSVMDSLRRDPNRKFVFAEMAFFTRWWGEQNPETHEQVK
KLVNSGQLEFVNGGWSMNDEATCHYIDMIDQMTLGHRFIMQTFNITPRAAWQIDPFGHSS
VQAYLMGAELGFDSLHFARIDYQDREKRKDEKSLEFVWRGSETFASSSQIFTNTFPVHYS
PPSGFHYEITDDYAPLQDDPLLDAFNIKDAVDNFVNASLFYANVTRGNHVMWTMGDDFQY
QFAESWFRQMDRLIHYVNKDGRVNAVYSTPSLYVDAKNAAKNITWPLKTHDFFPYADRDS
AYWTGYFTSRPAFKRYVRSLSGYYLAARQLEFLVGKKSGGPNTFRLGDALAIAQHHDGVT
GTAKQHVTNDYAKRLAHGASEAEAVVNSALAHLMNKARTKPDISLAQCSSMNMSYCPVTE
ETISGQKSLILVAYNSLAWNRTEVIRIPVNDAGLNVEDSSGKTLDAQYIPMDNVTSNLRS
NYSKAYLGVSSQQIPKYWLVFKATVPPLGWNTFFISKEPGKGSDKNKHSPGTFSPMKGIT
EIGPGNLKLVFSPDSGLLKQMHNSRTGANILVDQNYLWYASNVGDSKNSQVSGAYIFRPN
ASLAYSVSSKPELQIVRGPLVDEVHQQFSPWVSQVIRVYKDKEHAEFEYTIGPLPVGKDY
VGKEVITRMVANMSTDKTFYTDSNGRDFLKRVRDNRTDWTLKVNEPIAGNYYPLNLGMYT
KDKKVELSVLVDRATGGGSIKDGELELMLHRRTCMDDSRGVEESLEETVCINGTCTGLTV
RGNYYVSINTVGGEGARWRRGTGQEIYTPLLMAFTHENKEKWKGSNSVKGNAMDPHYAFP
PNVALITLEELDLGNVLLRLAHLYEAGEESEYSKVAKVELKKLFPGKTIKGVKEMSLVAT
QEKAKMKEKMKWKVEGEAEQSQSSSHPQKGGPLDSSALVVELAPMEIRTFLLQFSQKQPA
KQQRRRKFILGF
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggtgatacccggtttgtctttgttgatctgtgttattgtttctgttaccacctgtctt
tcttttaaaagcgttaatggcgtttacgttaagtacggcaccgaagctagagtcgtgcct
gacaaactcaacgtccatcttgtcccgcattctcatgacgatgtcgggtggttgaaaacc
gttgatcagtacttcatcggatcaaacaacagtatccagaaagcatgcgtgagaaacgtg
atggactcggtgatggactcgctgcgtcgcgatcccaatcgaaagtttgtgtttgcggaa
atggcattctttacgcgttggtggggagaacaaaaccccgagacacacgaacaagtgaag
aagcttgtgaactccggacaacttgagtttgtaaacggaggatggagtatgaacgacgaa
gcaacgtgccattacatagacatgatagaccagatgacgttagggcatcggtttataatg
cagacgttcaatataacgcctcgtgctgcttggcaaatagatcctttcggtcattcctcc
gtacaagcttacctcatgggagcagagctagggtttgattctctccatttcgctagaatc
gattaccaggacagggagaagcgcaaggacgagaaatccctagaattcgtctggagagga
tccgaaactttcgcatcgtcttctcagatattcaccaatacttttccagttcactatagt
ccacccagtgggtttcactatgagatcaccgatgattacgctcctctccaggatgaccct
cttttggatgccttcaacatcaaggatgctgttgataatttcgtcaatgcttccctcttt
tatgccaatgtgactcgagggaaccatgtgatgtggacaatgggtgatgattttcagtac
cagttcgccgagtcttggttcagacagatggacagattgattcattatgttaacaaggat
ggccgtgtgaacgccgtgtactccacaccatctctctatgttgatgccaagaatgctgcc
aagaacatcacttggcctctcaagactcatgactttttcccatatgcagatcgggatagc
gcctactggactggctacttcaccagccgccctgcttttaaacgatatgttcgctctctt
agcggatactacttggctgcaaggcaacttgagtttctggtgggaaagaaatctggaggt
ccaaacactttcagacttggggatgctttagcaatagcgcagcaccatgatggtgtcact
ggaactgccaagcagcatgtgacaaatgattatgccaaaagactagcacatggtgcttct
gaggcagaagcagttgtgaattctgcgctggcacacttaatgaacaaggcacgtacaaag
cctgacatatcattagcccagtgctcgtcgatgaatatgagctattgcccagtgacggaa
gaaaccatttcaggccagaagagcttgattctggtggcctataactcccttgcatggaat
cgtacagaagtcatcaggataccggtcaatgatgcaggtttaaacgtggaagattcatca
ggaaaaacccttgatgctcagtacattcccatggataatgtcacgagcaacctgagaagt
aactattcgaaagcgtatttgggagtatcttcacaacagattccaaagtattggcttgtg
tttaaagcaacagtgccgccacttggttggaacacattcttcatatctaaagaacccggg
aaaggaagcgacaaaaacaaacactctccagggacgtttagtccaatgaagggtataact
gaaattggtccaggaaatctgaagctggtgttttctccagactctggtcttctcaaacag
atgcacaactccagaacaggagctaacatactggtggatcagaactatctctggtatgct
tcaaatgtgggggactcaaaaaattcccaagtttccggtgcatatattttccgacctaat
gcttccttggcatattctgtttcgtcgaaaccagagttgcagatcgtgagagggcctcta
gtagatgaggtgcaccagcagttcagtccttgggtatcacaggtgataagagtgtacaaa
gataaagagcatgcagagtttgagtacactattggtccactacctgttggtaaagattac
gtaggaaaagaggttattacacggatggtagcaaatatgagtacagataaaacgttttat
actgactctaacggaagagactttctgaaacgggtgagggataacagaacagactggact
ctcaaagtgaacgaaccaatagcaggaaactactatccgctgaatctgggaatgtacaca
aaagacaagaaagtagagttgtcggtgttggttgatagggctactgggggtggtagtatc
aaggacggtgaattagaattgatgctccacaggcgtacgtgcatggatgattcgagagga
gtggaggagagccttgaagaaactgtgtgcatcaatggtacatgcacaggattaacggta
cgtgggaattactatgtaagcattaatacggtaggaggagaaggagcgaggtggagacga
gggacaggccaagaaatatacactccgcttctaatggcgttcacacacgaaaacaaggag
aaatggaaaggctccaattctgtgaaaggcaatgcaatggatcctcactatgccttccct
ccaaacgttgcgctcatcactcttgaggagctggatctcggcaacgttcttctccgcctc
gctcatctctacgaggctggagaagagagtgagtactcgaaagtcgctaaagttgagctg
aagaagttgtttcctgggaaaacaatcaaaggagtgaaagaaatgagtttggtagcgact
caagagaaggctaagatgaaggagaagatgaagtggaaagtggaaggtgaagccgaacaa
tctcaatcttcatctcatccgcaaaagggtggaccacttgatagctccgcactagttgta
gagcttgctcccatggagattcgtactttcttgctccagttctcgcagaagcagcctgca
aaacaacaaaggagaagaaagtttattctgggattttga
DBGET
integrated database retrieval system
