Brassica napus (rape): 106366361 Help Entry 106366361         CDS       T04128                                  Name (RefSeq) protein CHROMATIN REMODELING 5   KO K11367   chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] Organism bna  Brassica napus (rape) Brite KEGG Orthology (KO) [BR:bna00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bna03021]     106366361    03036 Chromosome and associated proteins [BR:bna03036]     106366361 Transcription machinery [BR:bna03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      106366361 Chromosome and associated proteins [BR:bna03036]  Eukaryotic type   Histone modification proteins    HAT complexes     SAGA complex      106366361     SLIK complex      106366361 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HTH_CHD1_Hrp3 Chromo CHD1-like_C HDA2-3 ResIII DEAD Chromo_MIT1 SWI2_SNF2 Motif Other DBs NCBI-GeneID:  106366361 NCBI-ProteinID:  XP_013661415 LinkDB All DBs Position A9:complement(5856683..5867393) Genome browser AA seq 1682 aa AA seqDB search MAFFRNYSNDTVSPSALDDNQDAATFQSSSPLQQDMDASYNAERGFDMNLDVQYQCEAEP GSSIGQQSQTGVAVSSGRRTGVSGKWGSTFWKDCQPMGQRDGAGSAKHSLDYLSNSEKLD SENENEEDKGMNKQQSGQGDVPAEEMLSDEYYEQDEDNQSDHVQYKAFGDPINSRSLPKT GSSIHSKSRTSRAIQKNIHYGDADIDYEEEEDEDDPEDADFEPYDAASGGDASKKNDQDW DVSDEDPDSDDDFDLPDSEDDYDTKKPKARQQGKGFRKLSSGLDRKSAQASSRQKRKPSY QEDFSEDDSDNEIDEGFRSLPRRGTTLGKNNGRSTNNIGQSSEVRSSTRSVRKVSYVESE DSEEIDDGRNRKTQKDDIEEEDCDAIEKVLWHQPKGMSGDAHTNKKLTVPVLLSQLFDTQ PDWNEMEFLIKWKGQSHLHCQWKSLTDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIE VSDVSKEMDLDIIKQNCQVERIIADRISKDDLGDVVPEYLVKWQGLSYAEATWEKDVDIA FAQAAIDEYKAREVSIAVQGKMVEQQRTKGKVSLRKLEEQPEWLSGGTLRDYQLQGLNFL VNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRKW LPDMNIIVYVGTRASREVCQQYEFYNEKNVGRPIKFNALLTTYEVVLKDKAVLSKIKWIY LMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPAKFKNKDE FVQNYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYK WILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNTKLDKIIL SSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQ AMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQE VVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETKKGANFDKNELSAI LRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEQVEEKDAGESEHELLGAFKVANFCN AEDDGSFWSRWIKPESVVTADEALAPRAARNTKSYVDHDRSQPDRTSKRKKKGSEPPDRS QKRRKTEYFVPSTPILEGTTAQVRGWSYGNLPKRDAQRFYRTVMKFGNHNQIACIAEEVG GVVEAAPEEAQVELFDALIDGCRESVETEDFESKGPVLDFFGVPVKANELLKRVEGLQLL SKRISRYDDPITQFRVLSYLKPSNWSKGCGWNQIDDARLLLGILYHGFGNWEKIRLDESL GLTKKIAPVELQHHETFLPRAPNLKERATALLEMELSAAGGKNTNAKASRKNSKKVVINQ LKAPARDRKGKSGPANLITIKDVGPRRTQKAEPLVKEEGEMSDDEEVYEQFKEQKWMEWC EDVLAGEIKTLERLQRLQTISADLPKEKVLFKIRRYLQILGRRIDEVVLEHEEDSYKQDR MTMRLWNYVSTFSNLSGDRLNQIYSKLKQEREEEEGVGPSQLNGSTAGRRQQRFKTPGPP QVHKGIDTAKFEAWKRRKRTENNDVHQSERPLMSNNSNSLGILGPAPSDRSHRARQAGFP PR NT seq 5049 nt NT seq  +upstreamnt  +downstreamnt atggctttctttaggaactactctaacgatactgtatcgcctagtgctctcgatgacaat caggacgctgctactttccagagttcgtcacctttacagcaagatatggatgcttcttat aatgccgaaagaggctttgacatgaacctggacgttcagtatcaatgcgaagcagaacca ggatctagtattgggcagcaaagccagacgggggtagctgtttcttccggaaggagaacg ggtgtatctgggaagtggggttccaccttttggaaagattgtcagccaatgggacagaga gacggcgctggttctgccaaacattcactagattatctatcaaacagtgaaaaattagat tctgaaaatgaaaatgaggaggataaaggaatgaacaagcagcagagtggtcaaggtgat gttccagctgaggaaatgctctctgatgaatattacgagcaggatgaagataatcaaagt gaccatgtccagtacaaagcgtttggcgatcctataaattctagatcactgcccaagacg ggatcttctatccatagcaagtcaaggacctcgagagcaattcaaaagaatattcactac ggtgatgctgatatagactatgaagaggaggaagatgaggatgaccctgaagacgctgac tttgagccctatgatgctgcttctggtggtgatgcaagcaagaagaatgaccaagattgg gacgtttctgatgaagatcctgacagtgatgatgatttcgatcttcccgattccgaggat gactacgacacaaaaaagcctaaggctagacaacaaggtaaaggtttccggaagttgagc tctggactcgataggaaatcagcccaggcttctagtcgtcaaaagaggaaaccatcatat caagaggacttctcagaggatgattctgacaatgaaattgacgaggggtttagaagcttg cccagaagagggacaactctagggaaaaacaatggaaggtctacaaataatataggacag agtagtgaagttcggagctccaccagatcagttcgaaaagtgtcttatgtggagagcgag gacagtgaagaaatagatgatgggagaaatcgaaaaactcagaaggatgacattgaagag gaggattgtgatgctattgaaaaagtgctttggcatcagccaaagggcatgagtggagat gctcacacgaataaaaaattaacagttcccgtgctactaagccaactttttgatactcaa ccagattggaatgaaatggaattcctaataaaatggaaaggtcaatcacacttgcattgt cagtggaagtcattgaccgatctccagaatcttagtggcttcaagaaggtacttaactac acaaaaaaagtgaccgaggagattaggtacaggacagcactctcacgagaggagattgag gtcagtgatgtgagcaaagaaatggatctggacatcattaagcagaattgtcaggtcgaa agaataattgcagatcgaatcagcaaagatgatttaggtgacgtggtgccagagtatctt gtaaagtggcaagggctttcttatgctgaagctacttgggagaaggatgtcgatatagca tttgcacaggctgctatcgatgagtacaaggctcgtgaagtttcaattgcagtgcaagga aaaatggtggaacaacagcgtacaaaagggaaagtaagtctgcggaagcttgaggagcag cctgagtggctaagcggaggtacgctacgggactatcagctgcagggtttgaattttctt gtcaacagctggcttaatgacactaatgtcattttggctgacgaaatgggtcttggtaag actgttcagtccgtttcaatgcttggatttttgcagaatacccaacaaataccaggtcct tttcttgtcgttgtgcctttgtcaacattagctaattgggctaaagaattcagaaagtgg cttcctgacatgaatataatagtatatgttggcacccgggcaagtcgagaggtttgtcag caatacgaattttacaatgaaaagaatgttggccggcccataaaattcaatgctctgttg accacctatgaggtggttcttaaggataaagctgttctctccaagattaagtggatttac ttgatggtggatgaagcacatagactgaaaaatagtgaggcacagctgtacacggccctt ttggaattcagcacgaagaataaattgcttattactggtactccactacagaatagtgtc gaagagctatgggctctgctccacttccttgatcctgccaagtttaagaataaggatgag tttgttcaaaactacaagaaccttagctcatttaatgaatctgagctcgccaatctccat ttagaattgagacctcatattctacgaagagtgatcaaggatgttgaaaagtctctgcct ccaaaaattgagcgtatactaagagttgagatgtcccctcttcagaaacagtattacaag tggatactggagcgcaacttccatgatttaaataaaggggtgcgcggtaatcaggtttca cttttaaacatcgtggtggagttgaagaagtgctgcaatcatcctttcttatttgaaagt gcagaccatggatatggtggtgacattaatgataacactaaactggataagattatccta agcagcggaaagctggttatcctagataagctgctggttagactgcgtgagactaagcat cgcgtgcttattttttcccagatggtaagaatgttagatatcctggcagaatacctctct cttagaggtttccagttccagagactggatggtagtaccaaggcagaacttcgtcagcaa gcaatggatcattttaatgctcctgctagtgacgacttctgctttcttctttcgacccga gctggtggtctgggaatcaatcttgctactgctgatacagtcgttatatttgactctgac tggaatccacagaacgatctgcaggcgatgagtcgagcgcacagaattgggcaacaagaa gttgtgaacatttatagatttgtcacgagtaaaagtgttgaggaagagatcctagagcgc gccaaaagaaaaatggttcttgatcatttggttattcaaaaactaaatgcggagggtagg ttggagaagcgggaaactaaaaagggagctaactttgacaagaacgagctttctgcaata ttaagatttggagcggaagaactttttaaagaggataaaaatgatgaagaaagcaaaaag cggctgttaagtatggatattgacgaaatcctagagagggcagagcaagtagaggaaaag gatgctggcgaatcagagcatgaactgttgggtgctttcaaggttgctaacttttgtaac gctgaagatgatgggtccttttggagtcgttggataaaacctgaatctgtggtcacagct gacgaagctcttgcaccacgggctgctaggaatacgaagagttatgtggatcatgatagg agccaacctgacaggaccagtaaaagaaaaaagaaaggatctgaacctccagatagaagt caaaagcgcagaaaaactgaatattttgtcccctcaactccaatattagaggggactaca gctcaagtgagaggctggtcctatggaaatctccctaagagagatgcacaacgattttat cgaactgtcatgaagtttggtaaccataatcaaattgcatgtattgcggaagaggtgggt ggtgttgttgaagcagccccggaggaagcacaggttgagctatttgatgctttaattgac ggttgtcgggaatctgttgaaacagaagactttgaatcaaagggtcctgtgttggatttc tttggtgtgccagtaaaagcaaacgaactattgaaacgtgtggaaggactccagctctta tcaaagcgtattagtcgatatgacgatccaattacacaattccgggtgttgtcctacctt aaaccttcaaattggtccaagggttgcggttggaatcagattgatgatgcgagattgctt ctggggatactttatcatggttttgggaactgggagaagataagattagatgagagcctt ggacttacaaagaagattgctcctgttgaacttcaacaccatgagacttttttacctcgt gctccaaacctaaaggagcgtgctactgctcttctggaaatggaactttctgcggcagga gggaaaaacacaaatgccaaagcatcacgtaaaaattcaaaaaaggttgtcatcaatcaa ttgaaagcacctgcaagagaccgaaaagggaaatctggtcctgccaatctaataacaata aaagatgttggacctcggagaacccaaaaagctgagccgctggtgaaggaagagggagaa atgtctgatgatgaggaagtttacgagcagtttaaggagcagaaatggatggaatggtgt gaggatgtattggctggtgaaatcaaaacacttgaacgtctacaaagattgcaaacaatt agtgcggatctgccaaaggagaaggtgcttttcaaaatccggagatatttgcaaatcctt gggaggagaatagatgaagttgttttagaacacgaagaggattcgtacaagcaagataga atgacaatgagattgtggaactatgtttcaactttctcaaatctgtcgggggatcgactc aatcagatctactccaaattgaagcaggagagagaggaagaagaaggggttggaccatcg caactcaacggctcaacagccggtaggaggcaacaaagattcaaaacaccaggacctccg caagttcacaagggcattgacacagcaaaatttgaagcatggaaaaggagaaaaagaaca gaaaataatgatgttcatcaatctgagcgaccactgatgagcaacaactctaactcactg ggaatactgggccctgcaccatctgatagaagccatcgggcacgccaagctggatttccg ccaagataa

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