Brassica napus (rape): 106366489
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Entry
106366489 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: alpha-L-arabinofuranosidase 2
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106366489
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
106366489
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GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
zf-CHCC
Motif
Other DBs
NCBI-GeneID:
106366489
NCBI-ProteinID:
XP_048595706
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Position
A9:8735204..8740709
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AA seq
676 aa
AA seq
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MNALLLAKPAGLKKNLAMMDRKWCSLTFLTSICLILFLLGSYAAYEHFRRVDAREDNEKH
YVTLQVEASNATGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSSIWPW
SIIGDESTISVVTDRSSCFERNKIALRMEVLCNSSGCPSEGVGVYNPGYWGMNIEKGKKY
KVTLYVRSTGDIDVSVSLTSSNGSLTLASEQIIALASEVSKWTKKEMLLEANGTDDGARL
QLTTTKNGSIWFDQVSAMPVDTYKGHGFRNDLFQMMVDLKPRFIRFPGGCYVEGDSLSNA
FQWKKTVGAWEERPGHFGDVWNYWTDDGLGHFEFFQLAEDLGAAPIWVFNSGISHHDQVE
TARIMPFVQEALDGIEFARGDANSTWGSVRAAMGHPKPFGLKYVAVGNEDCGKKYYKGNY
LEFYNAIKKAYPDIKIISNCDGSSQPLDHPADYYDYHVYTLAKELFSMSHMFDKTSRDGP
KAFVSEYAVNITDANTGNLLAALGEAGFLLGLEKNSDVVGMVSYAPLFVNTNDRRWLPDA
IVFNSSHLYGTPSYWVQQFFTESSGATLLSSTMEGNSSYVEASAISFQSNGSDYIQIKAV
NFANVTVELKVKMTGLDSSNTKASAKKKKVLTSASVMDENSFSNPEMIKPQESIGVMSEG
NFTFVLPPYSFSSFDI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccttattgctagcaaagcctgccggattgaaaaagaatttggcgatgatggac
aggaagtggtgttctctgacgtttctgacaagtatttgcctgatattatttctccttggc
tcttatgctgcttacgagcattttcgtcgtgttgatgctcgagaagacaacgaaaaacat
tatgtgacactgcaagtagaagcttccaacgccacaggacgacccattcctgaaaccctt
tttgggatcttctttgaggaaatcaatcatgctggagcaggtggactgtgggctgaactt
gttagcaacagaggatttgaagctggtggacaaatcattccttccagtatctggccttgg
tccattattggagatgaatcaaccatatctgtagttacagaccgctcttcatgttttgag
cgcaacaaaattgcacttagaatggaagtgctttgtaacagcagtggttgtccatcagaa
ggagtcggggtttataacccgggttactggggcatgaacattgaaaaaggaaagaaatac
aaagtgaccctgtatgtgcgttccactggggacatcgatgtgtctgtgtctttgacaagc
tcgaatggatcactaactcttgcatcagagcagattatagctttggcttctgaggtttca
aaatggacaaagaaggaaatgcttttggaggcaaatggaacagatgatggcgcaaggctt
caattgacaactaccaaaaatggttcaatctggtttgatcaagtctcagccatgcctgtg
gatacttataagggacatggttttaggaatgatcttttccaaatgatggttgatctcaaa
cctcgtttcatccgtttccctggtggttgttatgtggagggtgattcgttaagcaacgca
ttccagtggaaaaaaaccgtgggagcttgggaagagaggcctggccactttggtgatgtt
tggaactactggacagatgatggtcttggccactttgagttcttccaactggctgaagat
ctcggtgcagctccaatatgggtgtttaacagtggaatcagtcatcatgatcaagttgaa
accgcacgtatcatgccgtttgttcaagaagcgctagatggtattgagtttgctcgtggt
gatgctaattcaacatggggatcagttcgagctgcaatgggacatccaaagccttttggc
cttaaatatgttgctgttgggaatgaagattgtgggaaaaaatactacaaaggaaactac
cttgagttctataacgctatcaagaaagcctatccagacatcaaaatcatctccaactgc
gatggatcgtctcaaccactcgatcaccctgctgattactatgattatcacgtttatact
cttgccaaggagttgttttccatgtcccatatgtttgacaaaacgtcgcgtgatggtcca
aaggcttttgttagtgaatacgctgtgaacataacagatgctaatactggaaaccttcta
gctgctcttggtgaagcaggtttcctccttggtttggaaaagaacagtgatgttgtagga
atggtaagctatgcacctctcttcgttaacacaaacgacagaaggtggttgccagatgct
atagttttcaactcgtctcatttgtatggaacaccaagctattgggtccaacagttcttc
acagagtcaagtggagcaactcttctcagctctactatggagggaaactcttcttatgtt
gaagcatctgccatatccttccaaagcaatggctctgattacatacagattaaggctgtt
aactttgcaaacgtgacagtagagctgaaggtaaagatgactggattggactcgagcaac
acgaaagcttctgcaaaaaagaagaaagtacttacatctgccagtgtgatggatgagaac
tccttctccaacccagagatgattaagccacaagaaagcataggggtgatgtcggagggg
aacttcacgtttgttctccctccctactccttttcgtcattcgatatttag
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