Brassica napus (rape): 106366788
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Entry
106366788 CDS
T04128
Name
(RefSeq) small RNA degrading nuclease 3-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106366788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106366788
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
RNases
106366788
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Adhesin_P1_N
Bap31_Bap29_C
DUF6809
CC_Liprin_beta
Motif
Other DBs
NCBI-GeneID:
106366788
NCBI-ProteinID:
XP_013661904
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All DBs
Position
A7:13872075..13875218
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AA seq
464 aa
AA seq
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MEHKLASAEKKVLVDLVKLVQRRRLEGENGGWKEFLSSSGFGLSVGDPSQRSDDVLVAFL
STFKKKEDLQQESPDKETPEQRLVRVTITHPRYPIHYEFPSLAEDWFVTKCGKKQSKVIK
STRMLAIRCEMVTCENGSEAVVRVAAVDRDLKVVLDNFVKPSLPVIDYKTDITGVTAEDL
EKETLSVADIQKKLRRFLSKGTILVGHGLHYCLQVLKVDHARVIDTSLVFNYTGAYSSRT
PSLLNLCKSVLDEELRMEGAAHNCVHDAAAAMKLVLAVVEKGVETSFPPTEKMLEVEKTM
QEAKKASLYLHRIPRNVPSQELKGLITGDFKVEVKPPKNLGPYYSAEVVFSSQEEANQAF
DNVDGDIVEEKRGLPQKMVQFQSSSGSISRLYVRKNVRDGGVPVKKRRKTENDSEETREE
NVHHCSSLESICEKHLKEIEELKEKLKAKEREFEAMVAEYQANN
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggagcataaactagcgagtgctgagaagaaggtgctagtggatctggtgaagctagtg
cagagacgacggttagaaggcgaaaacggaggatggaaggagtttctaagctctagcgga
ttcggcttgagtgtgggcgatccttcgcaacgctccgacgatgtgttggtcgcttttctt
tccactttcaaaaagaaggaagatttgcagcaagaatcccctgataaagagactcctgag
cagaggcttgttagagtgactattacgcatcctaggtaccctatccactatgaattccct
tccctcgccgaggattggtttgtaactaagtgtggcaagaagcagtcaaaagtgatcaag
tcaaccagaatgcttgctattcgttgtgagatggttacctgtgaaaatggcagtgaagct
gttgtcagggttgccgctgtggaccgtgatctaaaggtggttcttgacaattttgtgaaa
ccgagcctacccgttattgactataagacagatatcactggagttactgctgaggatctc
gagaaagagactctatctgttgctgatattcagaaaaaactgcggaggtttctttctaag
ggaactattttagttggtcacggtttgcactattgtcttcaagtgttgaaggtagatcat
gcgagagtaatcgatacctctcttgtcttcaattataccggtgcctacagttctcgaaca
ccttctttgttaaatctatgcaagtctgttttggatgaggagctgcgaatggagggtgct
gctcacaattgcgttcacgacgctgccgctgctatgaagcttgtgcttgctgttgtggag
aaaggagtagagacctcgttcccaccaactgaaaaaatgttggaggttgagaagacaatg
caggaggcgaagaaggcaagtctctatcttcataggatccctcgtaatgttccttctcaa
gagttaaaaggacttattacgggagatttcaaagtcgaggttaagccaccaaagaatcta
ggaccttattatagcgcagaagttgtttttagtagtcaagaggaagcaaatcaagcattt
gataacgttgatggagatatagttgaggaaaaaaggggcttgccacagaaaatggttcag
tttcaatcgagttctggatcaatatctagactatacgttcgcaaaaatgttcgagatggt
ggagtccctgtcaaaaagagaaggaagacggagaatgattctgaggagaccagagaagag
aatgtacaccattgcagcagcctagagagcatttgtgaaaagcatttaaaggaaattgaa
gaactgaaggagaagctcaaagctaaggaacgtgagtttgaggctatggttgcagagtac
caagcgaataactaa
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