Brassica napus (rape): 106366839
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Entry
106366839 CDS
T04128
Name
(RefSeq) homeobox-leucine zipper protein HDG5
KO
K09338
homeobox-leucine zipper protein
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106366839
Transcription factors [BR:
bna03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
106366839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
HALZ
CENP-F_N
DivIC
Motif
Other DBs
NCBI-GeneID:
106366839
NCBI-ProteinID:
XP_013661958
LinkDB
All DBs
AA seq
824 aa
AA seq
DB search
MLTIGEESVMTSDNRFASPPPPASSSPATIQNPNFNFIPFNSFSSIIPKEEHGMMSMSMM
MMMGDEAVEEMMENGSVGGSFGSGSEQAEDPKSGTEFDVNELRDDEQPPPAKKKRYHRHT
DRQIQEMEALFKENPHPDDKQRQRLSHELGLKPRQVKFWFQNRRTQMKAQQDRAENVMLR
ADNDNLKLENSQLQAELRCLSCPSCGGPTVLGDIPFNELHIENCRLREELDRLCCIASRY
TDRPMQPMPPSQPLINPASELPHHQPSLELDISAYAGNYPDHPCSDLMSLPPQDSACFFP
TQTINNSSNNMLLADEEKVMAMEFAVSCVQELAKMCDTEEPLWVNKISDKIGGETLCLNE
EEYMRLFPWPMEKNNNNGDFRREASKANAVVIMNSITLVNAFLNADKWSEMFCSIVARAK
TVQIISSGVSGASGSLMLMYAELQVLSPLVPTREAYFLRYVEQNSENGNWAIVDFPIDSF
HDQNSPHEYKRKPSGCIIQDMPNGYSKVKWVEHVEVVERHVHETFAEYVKSGMAFGASRW
VDVLERQCERMASLMARNITDLGVIRSAEARRNMMRLSQRMMKTFCVNISTSYGQSWTAL
SETAKDTVRITTRKVCEPGQPTGVVLVAVSTTWLPFSHFKVFDLLRDQHHHSLLEVLFSG
NSSHEVAHIANGSHPGNCISLLRINVASNSWHNVELMLQESCIDNSGGLIVYSTVGVESI
QHVMNGEDPSNVPFLPLGFSVVPVNPPGEVEGISVNSIPPPSCLLTVGIQVLASNVPTAK
PNLSTVTTINNHLCSIVNQITSVLSSTISPTIASSAAAAKQDVI
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaataggggaagaaagtgtgatgacatccgacaacagatttgcttcaccgcct
ccgcctgcttcttcttctccggcaacaatccaaaaccctaattttaatttcatccctttc
aactcattttcctccattatcccgaaggaggagcatggaatgatgagtatgagcatgatg
atgatgatgggagatgaagcagtggaggaaatgatggaaaacgggtcggtgggtgggtca
ttcgggtcgggtagtgaacaagcagaagatccaaagtccgggactgagtttgatgttaat
gaacttcgagacgatgaacaacctcctcctgcgaagaagaaacgttaccacagacatact
gatcgtcagatccaagaaatggaggcattgttcaaagaaaaccctcatccagacgacaag
caaagacaaagattaagtcatgaacttggtctcaagcctcgacaagtcaagttttggttt
caaaataggcgtacccaaatgaaggcacaacaagaccgagcagagaatgtgatgttaagg
gcagataacgataacctcaagttggagaattctcaacttcaggcggagcttcggtgcctc
tcgtgtccttcttgcggcggccccaccgtcctcggcgacattcctttcaacgaactccac
attgagaactgtcgcctccgtgaagagcttgatcgtctatgctgcatagcttcaagatac
acagatcgtccaatgcaacccatgccaccatctcagccgttgatcaatcctgcttcggag
cttccacatcaccaaccttcattggagttagatattagcgcatacgctggtaactatcca
gatcatccttgttcagacttgatgtcgcttcctccacaagacagtgcttgtttcttccca
actcaaactattaacaacagcagcaacaacatgttacttgcggatgaagaaaaggttatg
gctatggaatttgctgtctcgtgcgtccaagaacttgctaaaatgtgtgacacggaagag
cctttgtgggtcaacaagatatcggacaagatcggtggcgagactttgtgtctgaacgag
gaagagtacatgaggttgttcccatggccaatggagaagaataacaacaatggagatttt
cgtagagaagcttcaaaggcaaacgcagttgttatcatgaacagcataacgcttgttaac
gcgtttctaaacgctgataagtggtcggagatgttctgctcaatagtggctagggcaaaa
acggttcagatcatttcatctggagtttctggagctagtggctctcttatgctgatgtat
gcagagttacaggtactatctccactggttccaactcgtgaagcttattttctacgttac
gtggaacaaaactctgaaaacgggaactgggcaatcgtagacttcccgatcgatagcttc
cacgaccaaaacagtccacatgagtataagagaaaaccttcagggtgcatcattcaagac
atgcctaatggatactcaaaggtcaagtgggtcgagcacgtggaggtagtcgagaggcac
gtgcacgagaccttcgcagagtatgtgaaaagcggtatggcttttggagctagccgctgg
gtcgatgtgttggagagacaatgcgagaggatggctagtctaatggctagaaacataacc
gatcttggagtgattcgatcagcagaagcgaggaggaacatgatgaggttatcacaaagg
atgatgaaaacattctgtgtgaatataagtacatcgtacggacaatcatggaccgcactg
tctgaaacagcgaaagacactgtgagaatcacgacaaggaaagtgtgtgagcctggtcag
ccaactggagttgttcttgttgctgtctcaacaacttggcttccattttctcacttcaaa
gtctttgatctcctccgtgatcaacatcaccactctctcttggaagttttgttcagtgga
aactcatctcatgaagttgctcatatagccaatggttcacatcctggaaactgcatatct
cttcttcgtatcaatgtagcgagcaactcatggcataacgtggagctgatgcttcaagag
agctgtattgataactctggcggcttaatcgtctactctacggtcggcgttgaatcaatc
cagcacgtgatgaacggtgaagatccttcaaatgttccgtttttgcccctcgggttctcc
gtcgttcccgtgaaccctcccggtgaggtcgagggtatttctgtcaattcgattcctccg
ccgtcgtgtcttctcaccgttgggattcaggtcttggcgagcaacgtcccaaccgcgaaa
ccgaatctctccaccgtcacaaccatcaacaaccacctttgctccatcgtcaatcagatc
acttcggtccttagcagcaccatttctccgaccatcgcatcttccgccgccgcagccaaa
caagatgtcatctaa
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