Brassica napus (rape): 106367019
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Entry
106367019 CDS
T04128
Name
(RefSeq) protein FIZZY-RELATED 1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106367019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106367019
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
106367019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
ANAPC4_WD40
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
106367019
NCBI-ProteinID:
XP_013662157
UniProt:
A0A816P112
LinkDB
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Position
A9:17855157..17858119
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AA seq
475 aa
AA seq
DB search
MEVDGEDPPKKPSSSSQLNLPPSMNRPTVSLETQRINRLIDSNHYHSPSKPIYSDRFIPS
RSGSNFALFGLEPSPGKEDGPGSYAGMLRAAMFEPDTPEKGDVVTGFSPSRKMFRYKTET
QRPVNSFSPLGGAGDDEAPGVSRSPVKPTRNILKSAYKVLDAPALQDDFYLNLVDWSAQN
VLAVGLANCVYLWNACTSKVTKLCDIGVDESVCSVSWALRGTHLAIGTSSGTVEIWDALR
CKRIRTMEGHRLRVGALAWSSSVLSSGSRDKSILQRDIRCQEDHVSKLTGHKSEVCGLKW
SYDNRELASGGNDNKLLVWNQHSTQPVLRYCEHTAAVKAIAWSPHLHGLLASGGGTADRC
IRFWNTTTNTSLNCVDTTSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTG
HTFRVLYLAVSPDGQTIVTGAGDETLRFWNIFPSPKSQSRESKIGALSFGRTTIR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgacggagaagatcctcccaagaagccatcttcttcctctcagctcaacctc
ccaccgtcaatgaatcgaccgacggtctcactcgagacccaacgaatcaaccgtttaatc
gactccaaccactaccactccccctccaaacccatctactccgaccgctttatccccagc
agatccggttccaacttcgccctcttcggcctcgaaccctcgcctggcaaagaagacggg
cccggttcttacgccggcatgctccgggccgcgatgttcgaaccggatacgccggagaag
ggagacgtcgttactgggttctctccgtccaggaagatgtttcggtataagacggagacg
cagaggccggttaactcgttctcgccgcttggtggggcgggtgatgatgaggctcctggt
gttagccgtagtcccgttaagccgacgaggaacattcttaagtcggcttacaaggtattg
gatgcgccggctctgcaagatgatttttacttgaatctagtagattggtcggcacaaaat
gttctggcagtgggattagccaactgcgtttatttgtggaatgcttgtactagcaaggta
actaagttatgcgatatcggagtcgatgagagcgtctgctcagtcagctgggcactacgt
ggaacacatttggctattggaactagtagcggaactgtagagatttgggatgcgttgcgc
tgcaagaggataagaacgatggaaggtcatcgactacgagttggagcattagcatggagc
tcatcggttttgtcttctggtagcagagacaagagcatacttcagagagacatacggtgt
caagaagatcatgtcagtaaactaactggtcacaaatccgaagtctgtggactcaaatgg
tcttatgacaaccgcgagctagcatcaggcggaaacgacaataagcttcttgtgtggaac
caacattcaacacagccggttttgagatactgtgagcacacagcagcggtgaaagccatt
gcgtggtcaccgcatctccacggacttcttgcctccggtggtggcactgctgatagatgt
atccgtttctggaacaccacgacaaacacttctttaaattgcgtggacaccactagtcag
gtgtgtaatttggcttggtctaagaacgtgaatgagcttgtgagcacgcacggatactcc
caaaaccaaatcatcgtttggaagtacccaaccatgtctaaattggcaactctcacggga
cacacgttccgtgttctgtatcttgctgtttcaccagatggacagacgatcgtgacagga
gcaggagatgaaactttaaggttctggaatatcttcccttccccgaagtctcagagcagg
gagagcaaaataggggcgttgtcttttggtagaacaacaatccggtga
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