Brassica napus (rape): 106367059
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Entry
106367059 CDS
T04128
Name
(RefSeq) uncharacterized protein LOC106367059
KO
K17925
sorting nexin-13
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bna04990
]
106367059
Domain-containing proteins not elsewhere classified [BR:
bna04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
106367059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
106367059
NCBI-ProteinID:
XP_013662202
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All DBs
Position
A9:complement(41442499..41447525)
Genome browser
AA seq
1017 aa
AA seq
DB search
MSSQKQAVTVRDLVEEAKKRIVILVICVVGLSYLLSLTSSSVWVNLPAAACLIILLRYFS
FDIEMKRKAAAYSNKPSSLSGPSLSKPPELPKAAPRSDWRSKVNSQVVEDALDRFTRHLV
SEWVLDLWYSRITPDKQGPEELVFIINHVLGELSRRFRNVNLIDLLTRDIIDIICRHVEL
FRECRAKIERKQRRSLSFEERDSELRRVMATNDKLHPALFSPESEHKVLQHIMDRLISLT
FRPEDMHCAFFHYTVRELLACCVMRPVLNLANPRFINERIEAAVISRTKTNGGSSAAKET
SQSEDLSEVSHDHFSRYMDPSVTGVELVQLKHEQQKRKNATDKQHVADLAKDPLLSMDTR
SSRSWESLPLTSKIVDDSKYLQGHRGGEGWGDILEKMSQRKTETLAPEHLESVWAKGRNY
KKKEGEKVVERVPSRLSINDGDNARPKNVNENTVNARGSSQPKVVDSHLSSYSSAEEDEE
TKSSHSSTSEDEETVTGLNSPGTRVWDGRTNKNPSVSRIHHPLENSGRRFKQTSKGHERY
EKASRHQSSRKRSKRSGLILGDDDSDDSEHDSLARSYSGISATSSASYNSMPESDLLSAP
RSSLLVDSFAKLRCEVMGANIVKSSSKMFAVYSISVTDDSNHSWSIKRRFRHFEELHQRL
KVFPEYNLYLPPKHFLSTGVDIPVIHERCVLLDTYLKKLLQLPRISGSIEVWDFLSVDSQ
TYAFSSSFSIIETLTVKPARKTSTVPTSIANMTEATPAPLPSRENLSSENGKSGQHVRNN
VMVDDLKSKVKAPGNDHTKTSDADVRNSKENGGLKVGNQADAMALPGLPTEWVPPKLTLP
LLDLVDVVLQLQEGGWIRRKAFWVAKQILQLGMGDALDDWVLEKIRLLRRGTVVASGIQR
VEQILWPDGIFMTKHPKRKQQSSTSDEEQQQEAERRAKFVHELMIEKAPATIVSLVGQNE
YKQCAEDLYFFLQSSVCLKQLAFDLLELLLLSAFPEMEKAFKQLHEEKHLFGQYTSN
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccagaagcaggcggtgacagttcgtgacctggtagaggaagccaagaagcga
atcgttatactagtgatatgcgtcgtaggactctcatacctcctctctctgacgagttca
tcggtttgggtcaacctccctgctgccgcgtgcttgatcatcctccttcgttacttctca
ttcgacatcgaaatgaaaagaaaggctgcagcttacagtaacaaaccgtcttcactgagt
ggaccgtctctaagtaaacctccagagcttcctaaagcagctccacggtctgactggaga
agtaaagtgaactcacaggtcgttgaggatgcattggatcgcttcactcgtcaccttgtt
tcggaatgggtgcttgatctctggtactcccggataactccggataagcaaggtcctgag
gagctggtgtttattattaaccatgttcttggagaactttcgcggcggtttaggaacgtt
aatctcattgatctgttgacaagggatataattgatattatatgtcgtcatgtggagctt
ttccgtgaatgtcgagcaaagattgagaggaaacaaaggagaagtctcagtttcgaagag
agagactcagaacttagacgtgtgatggctacaaatgataaactgcaccctgcattattc
tcccctgaatctgaacataaggttttgcaacatataatggacagactcatttcacttacg
tttaggcctgaggatatgcactgtgcttttttccattataccgtgagggagcttcttgct
tgctgtgtgatgcgaccagtcctaaatttagccaatcctcggttcattaatgagaggatt
gaagctgctgtgatatcaaggacaaagactaatggcggatctagtgctgcaaaagagact
tctcaatctgaagatctctcggaagtttctcatgatcatttttcgagatatatggatccc
tctgtcacaggtgttgagcttgtgcaactgaaacatgaacagcaaaaaaggaagaatgct
acagataaacagcatgtagcagatttggccaaagatccattgctttcaatggacactcga
tcttcccgatcgtgggagtccctccccttaacttccaaaatagttgatgatagtaaatat
cttcaagggcatcgaggaggagagggatggggtgacatattagagaagatgtcacaaagg
aaaactgagacccttgctcccgagcatcttgaaagcgtgtgggcaaaaggaagaaattat
aaaaagaaggaaggtgagaaagttgttgagcgggtgccctcgagactttctatcaacgat
ggtgataatgcacggcctaaaaacgtcaatgaaaacactgtgaatgcaagaggatccagt
cagcctaaggtagtagacagtcacttatcaagttattcctctgctgaagaggacgaggaa
acaaagagtagtcattcttctacatctgaggacgaggaaacggtaacaggtctaaacagt
cctgggactcgagtctgggatggtcgaacgaacaaaaatcctagtgtttcacggatacac
catccacttgaaaattctggtcgtcgtttcaaacagaccagtaaagggcatgaacgttat
gagaaagcatccaggcatcagtctagcaggaagagatccaaacgttctggactcattcta
ggcgatgatgatagcgatgattctgaacatgattctttggcgagatcatacagtggaatc
tctgcaacatcgtctgcatcatacaattcaatgccagaaagtgaccttctcagtgcccct
agaagttctttgttggttgattcctttgccaaattgagatgtgaggttatgggtgccaat
attgtgaagagtagttctaagatgtttgccgtgtattcaatttccgtcacagatgatagt
aatcatagctggtctatcaaaagaagatttcgacattttgaagagcttcaccagcggctt
aaagtgtttcccgagtacaatctttatttaccgccgaagcatttcctatcaacaggcgtg
gacatacctgttatacacgagcgatgtgtactgcttgatacctatctcaagaagcttttg
caactaccaagaatttcaggatcaatcgaagtgtgggatttcctcagtgtggattcccag
acttacgccttctcaagttctttctctatcattgagacgctcacggttaaacctgcccgt
aagacatctacagttcctacaagtatagccaatatgaccgaggcgacgccagctcctctt
ccttcgagagaaaacctgagttcagagaatgggaaatcgggtcaacatgtgaggaataac
gttatggtggatgatctgaagtcaaaagtgaaagctcctggaaatgatcatacgaagacg
tctgatgcagatgtgagaaatagcaaagagaacggcgggcttaaagtgggtaatcaagct
gatgcaatggccttacccggcctgcccacagagtgggttcctccaaagctaacattgccc
ctactagacttggtagatgttgtcttacagctccaggagggtgggtggatcaggcggaaa
gctttttgggttgccaaacagatacttcaacttgggatgggcgatgcattagacgattgg
gtactcgagaaaattcgtcttttgcggcggggaactgtagttgcttctggaattcagcgg
gttgaacagatactatggccggatgggatatttatgacaaaacatccaaaaaggaagcaa
caatccagtacttctgacgaggagcagcaacaagaagcagagagacgagccaagtttgtt
catgaattaatgattgaaaaagccccagcgactatagtgagccttgtgggtcaaaacgag
tataaacaatgtgcggaagacctctacttcttccttcagtcatcagtgtgtctaaagcaa
ttggcatttgaccttctggagctgttgctactctctgcgtttccggaaatggagaaggct
ttcaaacagttgcatgaagaaaaacacctctttggtcaatacacatcaaactga
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