Brassica napus (rape): 106367464
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Entry
106367464 CDS
T04128
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106367464
Membrane trafficking [BR:
bna04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106367464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
106367464
NCBI-ProteinID:
XP_048602198
LinkDB
All DBs
Position
C1:17734565..17746485
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AA seq
1827 aa
AA seq
DB search
MENNNNLSLRFRKIPRQPLSLPKLEPLLDGNLEQWPHLNQLVQCYGTEWIKDANKYGHYE
TTRPDTFQTQIFEGPDTDTETEFHLASARSATLDEDVASVSGTPFTDSGSPKHFGLPPLP
AYEPAFDWENERSMIFGQRTPESPAASYSSGLKISVRVLSLAFQSGLVEPFYGSISLYNQ
ERKEKLSEDFYFHISPTEMQDAKPSSENRGVFYLDAPSASVCLLIQLEKTATEEGGVTTS
VYSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAVVPLFDNNITTNTGESASPSSPLTPS
MTAASSHDGVFEPMAKITSDGKQGSSGGSSVVVEISNLNKVKENYSEESIQDPKRKVHKP
VKGVLRLEIEKHRNGHGDVEDLSENGSIRNESLDLTDRLGDLTLMKCPSAGSGGPHNSGS
KWSTEDVSKNLTSSSGNVDNCYYAFDFCSTTRNEPFLHLFHCLYVYPVAVTLSRKRNPFI
RVELRKDDTDVRKQPLEAIYPREPGVSLQKWAHTQVAVGARAASYHDEIKVSLPATWTPS
HHLLFTFFHVDLQTKLEAPRPVVIGYASLPLSTYIHSRSDISLPVMRELVPHYLQETTKE
RLDYLEDGKSIFKLRLRLCSSLYPTNERVRDFCLEYDRHTLRTSPPWGSELLQAINSLKH
VDSTALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVDILTRVQQVSFDDADRNRFLVTY
VDYSFDDFGGNQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLSMAWFFLELIVKSMAL
EQARLFDHNLPSGEDVPPMQLKESVFRCIMQLFDCLLTEVHERCKKGLSLAKRLNSSLAF
FCYDLLYIIEPCQVYELVSLYMDKFSGVCQSILHECKLTFLQIISDHDLFVEMPGRDPSD
RNYLSSILIQELFLSLDHDELPLRTKGARILVILLCKHEFDARYQKAEDKLYIAQLYFPF
VGQILDEMPVFYNLNATEKREVLIGVLQIVRNLDDTSLVKAWQQSIARTRLYFKLMEECL
ILFEHKKAADSILGGNNSRGPVSEGTGSPKYSERLSPAINNYLSEASRQEVRLEGTPDNG
YLWQRVNSQLASPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEENVSAT
VSLQVLEITEKFSSMAASHNIATDYGKLDCITTILTSFFSRNQSLAFWKAFFPIFNRIFD
LHGATLMARENDRFLKQIAFHLLRLAVYRNDSVRKRAVIGLQILVKSSLYFMQTARLRAL
LTITLSELMSDVQVTHMKTDNTLEESGEARRLQLSLSEMADEAKSVTLLRECGLPDDTLL
VIPGKFTENRWSWAQVKQLSDSLVLALDASLGHALLGSVMAMDRYAAAESFYKLGMAFAP
VPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVARNDGVWSKDHVSALRKIC
PMVSGEFTTEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCASILELVIPVY
KSRKAYGQLAKCHTLLTNIYESILDQESNPIPFIDATYYRVGFYGEKFGKLDRKEYVYRE
PRDVRLGDIMEKLSHIYESRMDSNHILHIIPDSRQVKAEELQAGACYLQITAVDAVMEDE
DLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFPAL
VNRVLVTKSESLEFSPVENAIGMIETRTTALRNELEEPRSSDGDHLPRLQSLQRILQGSV
AVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQE
FHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacaacaaccttagccttcgcttccgcaagattcctcggcagcctctttct
ctccccaagctcgaacctttgcttgatgggaatctggaacagtggccgcacttgaaccaa
ttggttcagtgctacggaacggagtggattaaggatgctaataaatacggacactacgag
actactcggcctgatactttccaaactcagattttcgaaggtcccgacactgatactgag
actgagttccatcttgctagtgctaggagtgctacattggatgaggatgtagccagcgtt
tctgggacgccctttactgattctggatcccccaagcattttgggctacctccactccct
gcgtatgaaccggcttttgactgggaaaatgaaagatctatgatatttggtcagagaact
cctgagtctcctgcagctagctattccagtgggttgaagatttctgtcagagttttgtct
ctagcttttcagtctggcttagttgaaccattttatggctccatttcattgtacaaccaa
gagaggaaggagaaactctctgaggatttttatttccatatttcgccaaccgaaatgcag
gatgccaaaccttcatctgaaaaccgtggagtgttttatctagatgccccatcagcatca
gtttgcttgctgattcagttagaaaagacagcaacggaggagggaggcgttacaacatct
gtctattcccgtaaagaacctgtgcacttaactgaaagggaaaagcaaaagttacaggtc
tggtcccgcattatgccttaccgagagtcttttgcctgggcagtcgttccgctttttgat
aataatatcaccacaaacactggcgaatctgcttcccctagcagtcctcttactcccagt
atgactgccgcaagttcccatgatggtgtttttgaacccatggcaaagatcacatcagat
gggaagcaaggttcttcaggtggaagttctgtcgttgttgaaatatctaatttaaacaaa
gttaaggagaactactctgaggagtcgattcaggaccctaaacgaaaggttcataaacct
gttaaaggagttctaagactggaaattgagaaacataggaatggacatggagacgttgaa
gatctatctgagaatgggagtatcagaaatgaatctcttgatctgactgaccgcctcggt
gacctgacgcttatgaagtgtcctagtgctggttccggtggaccccataacagtggttcc
aagtggagtacagaggatgtttcaaaaaacctaacgagctcaagtgggaatgttgacaat
tgttactatgcttttgatttctgctctacgacaagaaacgagccttttctacatctcttc
cattgcctttatgtgtatcccgtagctgttacactgagtcggaagaggaatccctttatc
cgggtagaattgagaaaggatgatacagatgtccgaaaacaaccactggaggcaatatat
ccaagagagcctggtgtgtcactccagaagtgggctcacacacaagttgctgttggagct
agagctgctagttaccatgatgaaattaaggtgtctctccctgccacctggacgccatca
catcatctgctattcactttctttcatgttgatctccagacaaagcttgaagctccaaga
ccagtagttattggatatgcatcacttccattgtctacatatatccactcacggtctgat
atttctcttccggttatgagagaactggttcctcattatcttcaagagaccaccaaggag
agattagattatttggaagatggcaagagtatttttaagttgagactgagactttgttca
tcgctttatcccaccaacgaacgtgtcagggatttctgtctagaatatgatagacatacc
ctccgaacaagccctccctggggttcagaactgttgcaggcaattaacagtttgaagcac
gttgactccactgccctgcttcagtttctctacccaattcttaacatgctccttcatctt
attggcaatggtggagaaactcttcaggtcgcagcattcagagccatggtggatatttta
actcgggtgcagcaggtgtcgtttgatgatgctgaccgaaatcgttttctggtcacctat
gttgattattcttttgatgattttggaggcaatcaaccaccggtttatccgggattatca
actgtgtggggaagtttagctagaagcaaggctaaaggttaccgggttggacctgtatat
gacgatgttttatcaatggcgtggtttttcctcgagttaattgttaaatcaatggcattg
gagcaggcacgtctttttgatcacaatctaccttcaggcgaggatgttccacccatgcag
ctcaaagaaagtgtctttcgatgtatcatgcaattgtttgattgtcttttaactgaagtt
catgaacgttgtaaaaagggtctaagcttggcaaaacgtctgaacagcagtttggccttc
ttctgctatgatctcttatatatcattgagccctgccaggtctatgaattggtatcgttg
tacatggacaagttttctggtgtttgtcaatctatcctacacgagtgcaagctcacattt
ttgcaaattatctccgatcatgatctctttgtagaaatgcctggcagagacccatcggac
aggaactatttatcatccatcttaatacaggagctatttctctccctggaccatgatgag
ctgcctctgcggacaaagggtgcaagaattttagtgatcctcttatgcaagcatgaattt
gatgctcggtaccagaaagccgaagataagctgtatattgcacagctatattttcctttt
gtggggcagattttagacgaaatgcctgttttctataacctaaatgctactgaaaagcgt
gaggttttaatcggtgtgttgcaaatcgttcgaaatctggatgacacatcacttgtcaag
gcatggcagcagagcattgctcgtacaagattgtatttcaaactcatggaagaatgtctt
atactatttgagcacaagaaagctgctgatagcatcctcgggggcaacaactctcgtggg
cctgttagtgaaggaactggatcaccaaagtactccgagcgactttctcctgctatcaac
aattatttgtcagaggcatcccgtcaagaagtcaggctagagggaacacctgataatggg
tacctgtggcagagagtaaattctcagttagcctcccctagccaaccttattccctaaga
gaagctttagctcaagcacaatcttcgcggattggagcttcagcccaggcattaagagaa
tcgctgcaccctattttaaggcaaaaactggaactctgggaagagaatgtaagtgctact
gttagcctccaggttttggagatcactgagaaattttcatcaatggcagcctctcacaac
attgctacggactatggcaaattggactgcattactacaatattgacaagtttcttctcc
cgaaaccagtcactagccttctggaaagccttctttcctattttcaacagaatctttgat
cttcacggggctacactgatggcaagggaaaatgatcgcttcttaaaacagatagccttc
catcttctccggcttgccgtttaccgaaatgacagtgtcaggaaaagagccgttattggt
cttcaaatactagtcaagagctcgctatattttatgcagactgctaggctgagggctttg
ctgaccattacactgtcagaactcatgtcggatgtccaagttactcatatgaaaacggat
aatacattggaagagagtggagaggcaaggcggcttcaactgtcattaagcgaaatggct
gatgaagctaagagtgtcactctgttgagggaatgtggtcttcctgatgatactctgttg
gtaattcccgggaagtttacagaaaaccgctggtcttgggctcaagtgaaacaactttct
gacagccttgttcttgctcttgatgcgagccttgggcacgctcttttgggatcggtgatg
gctatggatcgatatgctgcagcagagagcttttacaaacttggaatggcatttgctcct
gttccagatcttcacataatgtggttgttgcacctatgtgatgctcaccaggaaatgcag
tcctgggctgaagctgcacagtgtgctgtggcggttgcaggtgtgattatgcaggccttg
gtggctagaaatgatggtgtctggagcaaggatcatgtctctgccttgcgtaaaatttgc
cccatggtaagtggcgagttcacgacagaggcatctgcagctgaagtagagggttacggt
gcttcaaagctaacagttgactctgccgtcaagtatctacagcttgcaaataagcttttc
tctcaagctgagctctaccatttctgtgcaagcattttggagcttgttataccagtttac
aagagcaggaaggcttatgggcagttggctaagtgtcacacgctgcttactaacatatac
gagtccattcttgaccaagaatcaaaccccatcccatttatcgacgccacgtattaccgg
gtgggattctacggagaaaagtttgggaagctggacaggaaagagtatgtataccgtgaa
ccgcgagatgtgcggcttggagatataatggagaagctgagccatatatacgaatcaagg
atggacagcaaccatattctgcacatcattccagattcgagacaagtgaaggcagaagag
ttgcaggccggagcgtgctacctgcaaatcactgcggttgatgcagtcatggaagatgag
gatcttgggagcagaagagagaggatattttctctttcgactggtagtgttcgagcacga
gtctttgaccggttcttgtttgatacaccgtttacaaagaacggtaagacgcaaggtggg
ttagaagatcagtggaagagaagaacagtgctgcagacggaaggatcgttccctgctctc
gtgaatagagtgttggttaccaaatccgaatcccttgaattctcgccggtggagaatgca
attggaatgattgaaaccagaacaaccgctcttagaaacgagctagaggagcctcgtagc
tcggacggggatcacttaccacggcttcagagtctgcagaggattcttcaaggaagtgtt
gcagtgcaggtcaacagtggagtcttgagtgtttgcacagccttcttatcaggtgagcct
gcaacgagattgcgttcgcaagagctgcagcaactcatcgcggcacttcttgaattcatg
gcggtttgcaagcgagccataagggttcacttcagattaatcggagaagaagaccaagag
ttccatactcagctcgtcaatggatttcagtctcttaccgcagagctctcccattacatt
cctgctatcttgtccgaactttag
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integrated database retrieval system
