Brassica napus (rape): 106367525
Help
Entry
106367525 CDS
T04128
Name
(RefSeq) ABC transporter B family member 20 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106367525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106367525
04147 Exosome [BR:
bna04147
]
106367525
04090 CD molecules [BR:
bna04090
]
106367525
Enzymes [BR:
bna01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
106367525
Transporters [BR:
bna02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106367525
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106367525
CD molecules [BR:
bna04090
]
Proteins
106367525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_29
AAA_16
YobI-ATPase
AAA_30
AAA_15
HTH_psq
Motif
Other DBs
NCBI-GeneID:
106367525
NCBI-ProteinID:
XP_013662767
UniProt:
A0A078JIY6
LinkDB
All DBs
Position
C4:complement(35355145..35370897)
Genome browser
AA seq
1399 aa
AA seq
DB search
MMISRGLFGWSPPHMQPLTPVSEVSEPPESPSPYPDPSETGGTATAAQAEDDEELEEEPD
EVEPPPAAVPFSQLFACADSFDWVLMILGSVAAAAHGSALIVYLHYFAKIVEVLAFSGER
SEDQYDRLVELSLTIVYIAAGVFVSGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFF
DTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLVIGFVNCWEIALITLATG
PFIVAAGGISNIFLHRLAENIQDAYAEAAGIAEQAISYIRTLYAFTNETLAKYSYATSLQ
ATLRFGIMISLVQGLGLGFTYGLAICSCALQLWIGRFFVTSGRANGGEIIAALFAVILSG
LGLNQAATNFYSFDQGRIAAYRLFEMITPSSSVANQEGAVPASVQGNIEFRNVYFSYLSR
PEIPILSGFYLTVPAKKAVALAGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE
WLRSQIGLVTQEPALLSLSIRENIAYGRDATLDKIEEAAKIAHAHTFISSLEKGYETQVG
RAGLAMTEEQKIKLSIARAVLLNPTILLLDEVTEGLDFEAERIVQEALDLLMLGRSTIII
ARRLSLIKNADYIAVMEEGQLVEMGTHDELINLGGLYAELLKCEEATKLPRRMPVRNYKE
SSVFQIERDSSAGCVQEPSPPKMIKSPSLQRGNGVFRPQDLCFYTEESPNDHNPAAPEKM
GEHGLPLDDTDKEPTMKRQDSFEMRLPELPKIDVHCPQQKSNGSDPESPVSPLLTSDPKN
ERSHSQTFSRPPSSSDDTKANGKDAQHKESPSFWRLAQLSFPEWLYALLGSVGAAVFGSF
SPLLAYVMALVVTEYYKSKGGHLREQVDKWCLILAGMGIVTVVANFLQHFYFGIMGEKTT
ERVRRMMFSAMLRNEVGWFDHEDNSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVIV
AFLIGLLLGWRLALVALATLPILSLSAIAQKLWLSGFSKGIQEMHRKASLVLEDAVRNIY
TVVAFCAGNKVMELYRMQLQRILRQSFLHGMAIGFAFGFSQFLLFACNALLLWCTALSVK
RGYMKLPTAITEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPTIEPDDNSA
LKPPNVYGSIELKNIDFCYPSRPEVLVLSNFSLKVSGGQTLAVVGVSGSGKSTIISLVER
YYDPVAGQVLLDGRDLKLYNLRWLRSHMGLVQQEPIIFSTTIRDNIIYARHNASEAEMKE
AARIANAHHFISSLPHGYDTHVGMRGVELTPGQKQRIAIARVVLKNAPIILIDEASSSIE
SESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDALAAKNGL
YVRLMQPHFGKGLRQHRLI
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctctagaggcttattcggatggtctccgcctcatatgcaaccactaacccca
gtctccgaggtctccgagcctcccgagtctccctctccctatcccgacccaagcgagacc
ggcggaactgctacggcggcgcaggcggaggacgacgaggagttggaggaggagcccgat
gaggtcgagccacctcccgctgctgttcctttctctcagctcttcgcttgcgccgatagt
ttcgattgggtgcttatgatcctcggctcggtggctgccgctgctcacggctccgcgctt
attgtgtacttgcactacttcgcgaagatcgtcgaggtccttgcgttctccggtgagaga
tctgaggatcagtatgatcgactcgtcgagctttctttgactattgtgtacatcgctgcg
ggtgttttcgtttctggttggattgaggtgtcgtgctggatactgactggagagaggcag
actgctgtgatcaggtccaagtatgtccaagtactgttgaatcaggatatgagtttcttt
gatacgtatggtaacaatggggatattgtgagccaagtgctgagcgacgttttgctcatt
cagtcagctttaagcgaaaaagtagggaattatattcataacatggctacgtttatcagt
ggacttgtcattggatttgtcaactgctgggaaattgcactcattacactagccactggt
cctttcatcgttgctgcaggaggtatatcgaatatatttcttcacagacttgctgagaac
atacaagatgcgtatgctgaagctgccggcattgctgaacaggcgatctcgtacattagg
actttatatgcctttacaaacgaaactcttgcaaagtattcttatgcaacctcccttcaa
gcaacactgagattcggtataatgattagtctagtgcaaggccttggacttggattcact
tatgggcttgctatatgctcgtgtgcgctgcaactttggattggacgattctttgttacc
agtggaagagcaaatggtggagaaattatagcagctctatttgccgttattctaagtggc
ctgggtttgaatcaagctgctacgaacttctattcgtttgatcaaggaaggattgctgct
tatagactgtttgagatgataactccgtcatcctctgtggctaatcaagagggagctgtg
ccggcctctgttcaaggaaatattgagttccggaatgtgtatttcagctatttgtcacga
ccagaaattccaatcttgagtggattttacctcactgttcctgctaaaaaagcagttgca
cttgctggtagaaatggttctggaaaaagcagtatcattcctctaatggaacgcttttat
gatccgacattaggagaagttcttcttgatggagaaaatattaaaaatctaaaactggag
tggctgagaagccaaataggcctggttacacaggagcctgctctgctaagcttgagcata
agagagaatattgcatatggtcgtgatgctactcttgataagatagaggaggcagctaaa
attgcgcatgcacacacgtttatcagctcacttgaaaaaggatatgaaactcaggtaggg
agagccggtttagcaatgacagaggagcagaaaataaaactttccatcgctagagctgtg
cttttaaatccaacaattcttctgcttgatgaagtaactgaaggactagatttcgaagct
gaaagaattgttcaagaagctcttgatcttctgatgttgggacggtcaaccataataata
gcccgacggctaagtttgattaaaaatgctgactatattgccgtgatggaggagggtcag
ctagttgaaatgggtacacacgatgaattgataaatcttggtgggttgtatgctgagctt
ctgaagtgtgaagaagcaacaaagctaccgcgaaggatgccagttaggaactacaaggag
tcttcagtatttcagattgagagggactcttcagctggctgcgtccaagagccatcacca
cccaaaatgatcaagtctccatctcttcaaagaggtaatggcgtgttccgtccccaggat
ctgtgtttttacactgaagaatcacctaatgatcataaccctgctgcacctgagaaaatg
ggggaacatggcttgcctctggacgatactgataaagagccaacaatgaaaaggcaagat
agtttcgagatgaggttaccagaacttcctaaaatcgacgtccactgtccacagcaaaaa
tcaaacggctcagatccagagtcccctgtttcaccccttttgacttcagatcccaaaaac
gagcgttcccattctcagacgtttagccgtcctcctagttcttctgatgacactaaagca
aatggtaaggatgctcaacacaaggagtcaccttcgttttggaggttggcacagcttagt
ttcccagagtggctttatgctctattagggagtgtgggtgctgccgtctttggttccttc
agtcctcttctggcttatgtcatggcgttggtagtcacggaatattataagagcaaagga
ggccacctgcgcgagcaggttgacaaatggtgtttgatccttgccggcatggggatagtg
acagttgttgccaatttcttgcagcatttctactttggtataatgggggagaaaacgact
gagagagttcggaggatgatgttctcagcaatgctgcgtaacgaagttggatggttcgat
catgaagacaacagtcctgatacgttatccatgcgtttagcaaatgatgctacttttgtc
cgagctgccttcagcaacaggctttcgatattcattcaagatagttttgctgttattgtt
gcttttcttattggattgctgcttggttggcgtttggcccttgttgcattagcaactctg
ccaatactctctctttctgccattgctcagaaactgtggctttctggattctcaaaaggc
atccaggagatgcatagaaaggcatcattagttctcgaggatgctgtacgaaatatctac
actgttgttgccttctgtgctggtaacaaggtgatggaactctacaggatgcaactccag
aggatactcagacaaagctttttacacgggatggctatcggttttgcgtttggtttctca
cagttccttctcttcgcctgcaacgccctcctcctatggtgcactgcgctatctgttaaa
cgcgggtacatgaagttacccacagctataacggaatacatggtcttctctttcgctaca
tttgcccttgtggagccatttggattagcaccttacatcctcaagcgacgcaagtctctc
atatcagtatttgaaatcatcgatcgagtcccgacgattgaaccagatgacaactctgct
ctcaagccgcctaatgtctacggaagcattgaactgaaaaacatcgacttctgctacccg
tctcgacccgaagtgttggtgttgagcaacttcagtctcaaagtcagtggggggcaaact
ttagctgtggttggcgtctcaggttctggtaaaagcacaataatctcactcgtggagaga
tactacgacccagttgctggtcaagtcctactagacgggcgcgacttaaagctatataac
ttgagatggttgagaagtcacatgggtctggtccagcaagagcccataatcttttccaca
accatcagagacaacatcatatacgcaaggcataatgcgagcgaagctgagatgaaggaa
gcagcgaggatagcaaacgctcaccatttcatcagcagcttacctcacggttacgacaca
catgtggggatgagaggtgtggaacttaccccaggacagaaacagcgaatagcgatagca
cgtgtggtgctgaagaacgctcccatcatcttgatagatgaagcaagctcgtctatcgag
tctgagtcaagccgggtcgttcaagaagctcttgacacgttgataatggggaataaaacg
actattctgatagcgcatagagctgctatgatgagacatgttgataacattgtggttctc
aatggagggagaatagtggaggaaggtacgcatgatgcgttagcagctaagaatggatta
tacgtccgtctaatgcaaccacacttcggcaaaggtctacgccaacatcgactaatatag
DBGET
integrated database retrieval system
