Brassica napus (rape): 106367990
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Entry
106367990 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106367990
04121 Ubiquitin system [BR:
bna04121
]
106367990
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106367990
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
106367990
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106367990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Rad50_zn_hook
Zn_ribbon_IFT122_C
zf-Nse
DUF7815
zf-FPG_IleRS
zf-HC5HC2H
DpnI
zf-RING_Vps41
Noc2
Motif
Other DBs
NCBI-GeneID:
106367990
NCBI-ProteinID:
XP_013663308
UniProt:
A0A816UCC5
LinkDB
All DBs
Position
C8:38486244..38488410
Genome browser
AA seq
314 aa
AA seq
DB search
MSGRNTHWCHRCQRGVYLRGPDSLCTYCGGGFVEEIDVSPFRAHRDLERGPTYDLMEAFS
AFMRSRLAERSHDRELTGRITASSGGGGGGSESFSSIAPFLIFGGQANNTSVEALLNTSP
GGIGITRGGNVNAGDYFYGPGLEELIEQLSSGTTHHRGPPPAAKSSIDALPTVKITQKHL
KSSDSHCPVCKEEFELKSEVKQMPCKHMYHSECIVPWLVQHNTCPVCRKELPSRGSSSST
ERDQNRRSNRRRNLFSSLWPFRSSSSSSTQNRRDTSNTATAEEGGQYSHHHQLQHQQQHE
QQSHMGYSGWPFDY
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcgaaacactcattggtgccacagatgtcaacgtggcgtctaccttcgcggt
ccagattctctctgcacctattgcggaggagggtttgtcgaagaaatcgatgtatctccc
tttagagctcacagggatctcgaacgtggtccaacgtacgatctcatggaagctttctca
gctttcatgagaagccgcttagccgaaagaagccacgacagagaactcacgggaagaatc
accgcctcttctggtggtggtggtggtggttccgagagcttctcaagcatagctcctttc
ttgatcttcggcggccaagctaacaacacttcggtcgaagccttgctaaacacctcgcct
ggtggtatcggtatcactcgtggcggcaacgttaatgctggcgactacttttacggacca
ggtcttgaagaattgatcgagcagctctcgtctgggacgactcaccatcgaggtccaccg
cctgcagctaaatcatctattgatgcgttaccaacggttaagatcacgcagaagcatctc
aagtcgtcggactctcattgtccggtttgtaaagaggagtttgagttgaagtcggaagtg
aaacagatgccgtgtaaacatatgtatcattctgagtgcattgttccgtggctggttcag
cataacacgtgtccggtgtgtcgtaaagagttgccgtcgagagggtcgtcttcaagcaca
gagagggatcagaatagaaggagcaacagaaggaggaaccttttctctagtctgtggccg
ttcaggtcgtctagctcaagctcgacgcagaaccgcagagatacaagcaacacagccact
gcagaagaaggagggcagtatagtcatcatcaccagctacaacatcagcaacaacatgaa
caacagtcacatatgggttatagtggatggccttttgactattaa
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