Brassica napus (rape): 106368082
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Entry
106368082 CDS
T04128
Name
(RefSeq) autophagy-related protein 18d
KO
K22991
WD repeat-containing protein 45
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106368082
Membrane trafficking [BR:
bna04131
]
Autophagy
Other autophagy associated proteins
Others
106368082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_2nd
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_Vps41
WDR55
Beta-prop_RSE1_2nd
Beta-prop_HPS5
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
RMC1_N
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
106368082
NCBI-ProteinID:
XP_013663423
UniProt:
A0A078GRE1
LinkDB
All DBs
Position
A9:35546617..35549464
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AA seq
387 aa
AA seq
DB search
MTSTVYNSQGILQPRGFTSPEPGFGDSDGAELVSVSWNQDYSCFSSGTSHGFRIYNCEPF
KETFRRELKDGGFKIVEMLFRSNILALVGGGPNSQYPSNKVLIWDDHQSRCISEFSFRSE
IRAVKLRRDRIVVVLEHKIYVYNFMDLRLLHQIENLANPRGLCCLSHHMNTSVLACPGVR
RGEVRVEHFGLNMVQIINAHDANIACMTMTLDGLLLATASTKGTLIRIFNTMDGTRLQEV
RRGTDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVSGEDSHSNEHETSSNSLQALV
TPASGVNPGSSLSFLRGVLPRYFSSEWSFAQFHVPEVTQFFAAFGAQNTIAIIGMDGSFY
RCSFDPVNGGEMTQLEYVRFLKPGTLK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaactgtttacaactcgcaagggatcctccaaccacgagggtttacgtctcca
gagccaggttttggtgacagtgatggagcagagttggtttctgtttcttggaatcaggat
tacagctgtttttcttctgggaccagccatggtttccggatatataactgcgagcctttc
aaggaaactttcaggcgagagctcaaggatgggggttttaaaatcgtggagatgcttttc
cggagtaatatcttggcgctcgttggcggtggacctaactctcagtacccttcgaacaaa
gtattgatttgggatgatcatcagagccgctgcatcagtgagttttcgttcaggtcggag
attcgtgcagtgaagttaagaagggatcggattgttgttgttcttgaacacaagatatat
gtctacaattttatggacctgagacttcttcatcagattgaaaacctggcgaatccgaga
gggttgtgctgcctctctcaccatatgaatacatctgtgctggcttgtccaggtgttcgt
cgaggagaggtccgtgttgaacattttgggcttaacatggtacagatcattaacgctcat
gacgccaatatcgcgtgcatgaccatgacactggatggattgcttcttgcaactgccagt
acaaagggaactctgattagaattttcaacacaatggatggaactcgtctgcaagaggtc
cgaagaggaacggacagagcagatatctatagcattgctctttcaccgaatgtgcagtgg
ctggcagtatcaagcgacaagggaactgttcatattttctctcttagagtgagggtttct
ggagaggactcgcactccaatgaacacgagacgtcttcaaattccctgcaggctcttgta
actccagccagtggtgtcaaccctggttcgtcattgtcatttctgagaggagttctgcca
aggtattttagctcggagtggtcatttgctcagttccatgtaccagaagtcacccaattc
tttgcagcatttggtgctcagaacacaattgctattatcggcatggatggaagtttctac
aggtgcagcttcgatccagtgaacggaggagagatgactcagcttgaatacgtccgcttt
ctgaagccggggaccctaaaatag
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