Brassica napus (rape): 106368196
Help
Entry
106368196 CDS
T04128
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bna
Brassica napus (rape)
Pathway
bna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106368196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106368196
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106368196
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106368196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
CIS_TMP
Med27
Motif
Other DBs
NCBI-GeneID:
106368196
NCBI-ProteinID:
XP_013663559
UniProt:
A0A816PGG7
LinkDB
All DBs
Position
A9:36090844..36098747
Genome browser
AA seq
1643 aa
AA seq
DB search
MAQTTTEGASQVVESVRFSFMTEEDVRKHSVLRVTKPILLDNVGRPVPGGLYDPLMGPME
DDRSKCKTCDQRNLDCPGHCGRIELVRPIYHPLLFNLLFIFLQRTCFFCHHFMVKKEVVA
RCVSQLKLIMKGDVIAAKQLSLKPTDSSPEECEDSDMGKQRWTSLQFAEATDVINQFLRL
KSRKCESCKAKPPKLEKPIFGWVRLDGMSAIDIGANVLRGVKAKKSANNGEDSDDGDESG
ISGLHEVEDGAKNKKGKSSKAAKDYGDLKKASKRDLLPIEVKEILEGLWDNEYEFCSFIG
DLWQSGSEKRDYSMFFLKSVLVPPTKFRAPTKGGDSVTEHAHTAGLNKVLEANIALGNAC
TNKLGLSKIVSIWMNLQETVNVLFDSKTATVKSQREGTGICQLLEKKEGLFRQKMMGKRV
NHACRSVISPDPFIAVNDIGIPPCFALKLSYPERVTPWNVEKLRQAIINGPDVHPGATHY
SDKVSTMKLPPTKKARIAIARKLLSSRGVNTELGKTCDVNFECKTVYRHMQDGDVVLVNR
QPTLHKPSIMAHIVRVLKGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRSEAYNIV
NANNQYARPSNGDPLRALIQDHIVSSVLLTKGDTFLDKEEFNQLLFSSGVTDMVLSSFSG
RSGKKVTQSASNAMLLTVTPAILKPVPLWTGKQVITAVLNEITKGHPPFSVEKSTKLPVD
FFKCRTREAKSKSGESSKKSKKNNFNEDKLLIRKNEFVRGVIDKAQFADYGLVHTVHELY
GPNAAGNLLSVFSRLFTVFLQTQGFTCGVDDLIILKDVDEKRTEQLRECEGVGEKVLRKT
FGVDVNAQIDPQDMKSRIERVLYEDGELALASLDRSVVSELNQCSGKGVMNDLLSDGLLK
TPGTNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRA
GGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTV
RDADGSIIQFQYGEDGVDVHRSSFIEKFQEMTLNQDMFLERCTEDMLSGSSSYITDLPIT
LKKGAEKFVEAMPMKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPST
QMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTNDDASQITDKL
RKITVADIIKSMEVSVIPFAVHGGEVCSIHKLKINLYKPEHYPKHTDITEEDWEETMTVT
FLRKLEDAIETHMKMLLRIRGIKIEKDNGPKSGNETDNDDSDSGKKAGGDDDDDDDEGED
TEADDLGADEQKRKKQATDEQDYEESDDDEKNEPSSVSGVVDPEMDDDEDEDGEVSKEET
PEEDKEDTLEAKKEVKSVQQESKKKKRQRFVSGEKDRHIFAEGKGKTFEVHFKFHKNEPH
ILLAQVAQKTAQKVYVQNLGKIERCTVANCGDPQVIYYGDNPKERAEISNEEKKASPALH
ASGVDFAGLWEFQDKLDVRYLYSNSIHDMLNTFGVEAARETIIREINHVFKSYGISVSIR
HLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEVDRLETPSA
RICLGLPALTGTGCFDLLQRMDL
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaccaccacagagggagcttcccaagtggttgagtccgttaggtttagcttc
atgacagaggaagatgtccgaaagcacagtgttcttcgagttacaaaacccatcctgctc
gataacgttgggagacctgtccctggtggtctctatgatcctcttatgggtccaatggag
gatgatagatcaaagtgtaaaacgtgtgatcagcgcaatttagattgtccaggacattgt
gggcgtatcgagcttgtccgtcctatctaccacccattgctgttcaatctcctcttcatt
tttttgcagaggacatgtttcttctgtcatcactttatggttaaaaaggaagtggttgca
agatgtgtctctcagctgaaactcataatgaaaggtgatgtgattgccgctaagcagctc
tctcttaaacccactgattcatcaccagaagaatgtgaagactccgacatgggaaagcag
aggtggacatctcttcagttcgctgaagccactgacgtcatcaatcagtttcttaggttg
aagtcaaggaagtgcgagtcttgcaaagcaaagcctcctaaactagagaagcctattttc
ggatgggttcgcttggatggtatgtcagcgatagatattggagctaatgtactgcgaggg
gttaaggctaagaagtcggctaacaatggggaagattccgatgacggtgatgagagtggt
atcagtggattacatgaagttgaagatggtgctaaaaataaaaaaggaaagtcttcgaaa
gcagctaaagactatggagatctcaagaaggcttctaaaagagaccttttgccgattgag
gtcaaggaaatcttagaaggtttgtgggataatgagtatgagttttgctccttcattggt
gatctttggcagagtggatctgaaaaaagggactattctatgttctttttgaagagtgtt
cttgtgcctcctactaaatttagagctccaacaaaaggaggtgacagcgttacggaacat
gctcacaccgcagggctaaataaggtcttggaagccaatatagcccttggaaatgcctgt
actaacaaattaggtctatccaagatagtttccatatggatgaatcttcaagaaacagtc
aatgtcttgtttgatagcaagactgccacagttaaaagccagagagagggtactggaata
tgtcaactgctggagaagaaagagggtctgtttcggcaaaagatgatgggaaagagagtg
aatcatgcttgcagatctgtgatatctccagatccttttattgctgtcaatgacattgga
attcctccttgctttgctttgaaattgagttatcctgagagggtgactccttggaatgtt
gaaaagttaaggcaggctatcattaatggtcctgacgttcacccgggagctacacattac
tctgacaaagtatctacgatgaagctgcctcctaccaaaaaagcacgaatagcaattgca
agaaagctattgtcctcacgaggagtcaatacagaacttgggaaaacttgtgatgtcaac
tttgaatgtaaaactgtctatcggcatatgcaagatggtgacgtcgtccttgtcaatcgt
cagccaacattacataaacctagtattatggctcacattgtccgtgttcttaagggggag
aaaacacttcgtctccactatgcaaattgcagtacatacaatgcagatttcgatggggat
gagatgaatgtccattttccacaagatgagatttcacgatctgaggcttacaatattgtc
aatgccaacaaccaatatgccaggccttctaatggtgatccacttcgagctttaattcag
gaccacattgttagttcggttttacttaccaaaggggacacctttttggacaaagaagaa
ttcaatcagcttctcttcagttccggcgtgactgacatggtactcagttctttttctgga
cgttctggcaagaaagtaacacaatcagcttctaatgcaatgctgttgactgttacgcct
gccattttgaaaccagtacctctttggacaggaaagcaggtcatcacggcagtgttaaat
gagataaccaaaggtcatcccccattcagcgtagagaaatctacaaaacttccggttgac
ttcttcaaatgtagaacaagagaagcaaaatctaaaagtggagaatccagcaaaaagagc
aagaagaataattttaatgaagataaactgctcatcagaaaaaatgaatttgtccgcggt
gtgattgacaaggctcagtttgcggactatggattggttcatacagtgcatgagctctat
ggtccaaatgctgcaggaaacctactttctgtttttagtcgtctcttcacagtcttcctt
cagactcaaggtttcacctgtggagttgatgatcttattattttgaaagatgtggatgaa
aagaggacggagcaacttcgagaatgtgaaggagttggtgaaaaagtactccgtaagacc
tttggcgttgatgttaatgctcagatagatcctcaggacatgaaatccagaattgagcga
gttctgtatgaggatggcgaacttgctttagcatctttggacaggagcgtcgtaagtgag
ctcaaccagtgttcaggcaagggggtgatgaacgatttgctctcggatgggttgttgaaa
acacctggaacgaattgtatctctctgatgacaatatctggggctaagggtagtaaggtt
aacttccagcaaatttcttctcaccttggccagcaagatttagaaggaaaaagagttccc
cgaatggtttcggggaagacactaccttgcttccatccatgggattggtcacctagagct
ggaggttttattagtgacagattccttagcggtctccgcccccaagaatactactttcat
tgtatggctggacgagaagggttagttgatactgctgtgaagacatcacgtagtgggtat
ctacagagatgtttgatgaaaaatcttgagagcctgaaagtcaactatgattgtacagta
cgggatgctgatgggtccatcattcagttccaatatggtgaagatggcgtggatgttcat
cggtctagcttcattgaaaagttccaagaaatgaccttaaatcaagatatgttccttgaa
agatgtaccgaagacatgctatctggatccagtagttacataactgatcttcctattacg
cttaagaagggagctgagaagtttgtagaggcaatgcctatgaaagaacgtattgcttct
aaaatggtgagacaagaagatcttctgaagctagtgaagtcaaaattctttgcaagtctc
gcccagccaggagagcctgtaggtgtacttgctgcacaatctgtaggagagccatcaact
cagatgacgttgaatactttccatcttgctggacgtggagagatgaatgtgacacttggt
attccacgtttacaagagatcttgatgactgctgctgcagacattaagacacccatcatg
acctgcccattgctgaagggcaaaacaaatgatgatgcaagtcaaatcactgataagttg
aggaagattacggtagcagatattatcaagagtatggaagtgtccgtcataccatttgca
gttcatgggggtgaagtttgcagtattcacaagcttaagataaatctctataagccagag
cattatccaaagcacacagatattactgaagaagactgggaagagacaatgacggtcacg
tttctgaggaagctggaagacgctatagagactcacatgaaaatgctcttgagaatcagg
ggcataaagattgagaaagacaacggtccaaaatccggaaacgaaacggataatgatgat
tcagatagtggaaagaaggctggaggcgatgatgacgatgatgatgatgagggagaggat
acagaggctgatgatcttggtgcagatgaacagaaacggaagaagcaagcaacagatgag
caggattatgaggaaagtgatgacgatgagaagaacgaaccatcttcagttagtggagta
gttgaccctgagatggatgatgatgaagatgaggacggagaagttagcaaggaagagacc
ccggaggaagataaggaagataccttggaagcgaagaaagaggtgaagagtgttcaacaa
gagagtaaaaaaaagaagagacaaagatttgtcagtggtgaaaaagacagacacatcttt
gctgaaggcaaaggaaagacatttgaggtccatttcaagtttcataaaaatgagcctcat
atattacttgctcaggttgctcagaagacagcacagaaagtttacgtccaaaaccttggg
aagatcgaacggtgcacggtagctaactgtggtgatcctcaagtgatatactacggagac
aacccaaaggagagagcagagatctccaacgaggaaaagaaagcctcaccagctctccac
gcatcaggagtagattttgccggtctctgggagtttcaagacaagcttgacgtcaggtac
ttgtacagcaacagcattcacgacatgctcaacacttttggagttgaagcagcgagagag
acgatcatcagggaaattaaccacgttttcaaatcgtacggtatctcagttagcatcaga
cacttgaacctcatcgcggattacatgacgttctctggtgggtaccgtccaatgagccgt
atgggaggaattgcagagtcaacttctccgttctgcagaatgacgtttgaaacagccact
aagtttattgttcaagcagctacttatggagaagtggacaggctagagactccctcagct
agaatatgtcttggcttgcccgctcttacgggaactggttgctttgacttgttgcagaga
atggacctctga
DBGET
integrated database retrieval system
