Brassica napus (rape): 106368297
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Entry
106368297 CDS
T04128
Name
(RefSeq) citrate synthase 2, peroxisomal-like
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna00020
Citrate cycle (TCA cycle)
bna00630
Glyoxylate and dicarboxylate metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
bna01210
2-Oxocarboxylic acid metabolism
bna01230
Biosynthesis of amino acids
Module
bna_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bna_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
bna_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
106368297
00630 Glyoxylate and dicarboxylate metabolism
106368297
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
106368297
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-GeneID:
106368297
NCBI-ProteinID:
XP_013663674
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All DBs
Position
C8:complement(39721033..39725774)
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AA seq
469 aa
AA seq
DB search
MERLNARLAVLSAHLEVSDPMPAATEPWCKSIAGPLAGNLTIVDERTGKKYQVPVSEEGT
VKSIDLKKITSGAHDKGIKLYDPGYLNTAPVRSSVSCTDGDEGTLRYRGYLIEELGESST
FLEVAYLLIYGNLPSQSQLADWEFAVSQHSAVPQGILDIIQSMPHDSHPIGSLASAISVL
SLFHPDANPSLSGLDIYKSTQVRDKQIFRILGQAPTIAAAAFLKTAGKPPVLPLSNLSYA
ENLLYMMESMGNKSYKPNPRLARVLDIIFILHAEHEMNCSTAAARHLASSGVDVYTAIAG
AVGAIGGPLHGGATKTVPQMLFEIGTVENIPEFIESVKNKNRKLSGFGHRIYKNYDPRAR
VVKRLAEEVFSIVGKDPLFEVAVALEKTALSDEYFVKRKLYPNVDFYCGLVYRAMGVPPH
FTAVARMAGYLAHWRESLDDPDTKIIRPQQVYTGVRLRHYQPVRDRTIM
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgaatgctcgtttggccgttctctctgcgcatttggaggtgtctgatccc
atgccggcggcgactgagccatggtgcaaatcgattgctggaccccttgcgggaaacttg
acgatcgttgatgagcgtacggggaagaaatatcaagtcccagtctcagaggagggtacc
gttaagtccattgatctcaagaagataacgagtggggcacatgacaaggggattaagttg
tacgatcctggttatttaaacacggctcctgttcggtcatcggtttcttgtactgacgga
gatgaaggaacattacgttataggggatacctaattgaagagttgggtgagagtagtact
tttcttgaggttgcttatctccttatttatgggaatctgccttcacaaagtcagctagct
gattgggaatttgcggtttctcagcattcagctgttccacaaggaatattggatatcatt
cagtccatgcctcatgattcacatccaataggttctcttgccagtgccattagtgtactc
tccctctttcatcctgatgcaaatccttctcttagtggcctagatatttacaagtcaaca
caagttcgtgataaacagatttttcgtattctcggacaggcacctactattgcagcagct
gcatttttgaagacggcaggcaagcctcctgttcttcctttgagcaacctttcttatgca
gagaacttactctatatgatggaatcaatgggaaataagtcttacaagcctaatcctcgt
ctagctcgagtgttggacatcatcttcatactacatgctgaacatgaaatgaactgctct
actgctgctgctcgccatcttgcctctagtggtgttgatgtgtacactgctattgcggga
gctgttggagccattggtggcccacttcatggtggtgcaactaagactgttcctcagatg
ttattcgagattgggactgttgaaaatattccagagtttattgaaagcgtgaagaacaag
aataggaaactgtcagggtttggacaccgcatttacaaaaactacgacccacgagcaaga
gtggttaaaagactggctgaggaagtgttctccattgttggaaaggatcctctgttcgag
gtagcagttgctctagagaagacagcactctctgatgaatattttgttaagagaaagcta
tacccaaatgttgatttctactgtggattagtctatagggcaatgggagtcccaccacat
ttcaccgcggtggcgcgtatggctggatacttggcacactggcgtgagtctttagatgat
cctgacactaagatcatcagaccccaacaggtctatactggagtgcgcctaaggcattac
cagccagtaagagatagaactatcatgtga
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