Brassica napus (rape): 106368420
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Entry
106368420 CDS
T04128
Name
(RefSeq) cysteine protease ATG4b isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106368420
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106368420
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106368420
03029 Mitochondrial biogenesis [BR:
bna03029
]
106368420
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
106368420
Membrane trafficking [BR:
bna04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
106368420
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106368420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
106368420
NCBI-ProteinID:
XP_013663833
UniProt:
A0A078HRH9
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All DBs
Position
A9:complement(36889077..36905392)
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AA seq
442 aa
AA seq
DB search
MKAICGRFLPSKCSSSNADENLDQSPTSPVSDSTLPLVSQTLREASTSEHQPVCTPHNDW
TVILKTASMASGAIKRLQDRVLGPSRIGIPSSTSEIWLLGVCYKISEIESSELAGAFRQD
FSSLVLMTYRRGFEAIGDTTYTSDVNWGCMLRSGQMLFAQALLFQRLGRSWRKDSQPPEE
EYLEILELFGDSEASAFSIHNLILAGESYGLAAGSWVGPYAVCRSWEALVRKRREETACS
MAVHIVSGSEDGERGGAPILCLEDATKTCLEYSKGETEWTSVLLLVPLVLGLDKVNPRYI
PSLIATFTFPQSLGILGGKPGASTYIVGVQEDKGFYLDPHGVQQVVTVNKETQDVDTSSY
HCNTVRYVPLESLDPSLALGFYCRDKDDFDDFCIRATKLAGDSNGAPLFTVTKSHRTGDR
GIAETSTVTCTCEEHEDEWQLL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctatatgtggtaggtttcttccttcaaaatgttcttcatcaaatgctgatgag
aaccttgatcagtccccaacgtctccagtatcagattcgacgcttcccttagtttctcaa
acgcttagggaggcttcaacgtccgagcatcagccagtttgcacaccacataatgattgg
acagtgattcttaaaacagcttctatggctagtggggctattaagagacttcaagaccgt
gttttagggccgagtaggataggtattcccagcagtacaagcgagatatggctactgggt
gtctgttataaaatctcagaaattgaatcctcagaattagctggtgcatttagacaagac
ttttcgtccttggtactaatgacatatcgtagaggttttgaagccattggagacacaact
tatactagtgatgtcaactggggttgcatgcttagaagcggccagatgctctttgcacag
gcattgctgtttcaaagactcggaaggtcttggaggaaggattctcagccacctgaagag
gaatacttagagatcttagaactttttggtgattctgaggcttcagcattctcgatccac
aatcttatactagctggagaatcttatggcctggctgctgggtcatgggtaggaccatat
gctgtttgtcgatcatgggaagcattagttcggaagagaagagaagaaactgcgtgttcc
atggctgttcatatcgtttctggcagcgaagatggggagagaggtggagctccgattctc
tgtttagaagatgccaccaaaacgtgtttggaatattcgaaaggagaaactgagtggacg
tcagttcttctcttggtcccactggttcttggacttgacaaagtgaacccaaggtacatt
ccatctctgatagccactttcacattccctcaaagtctgggcattttgggcggcaaacca
ggtgcatcaacttacatagttggagttcaagaagataaaggtttctaccttgatccgcac
ggtgttcaacaggtagtgacagtcaacaaagaaactcaagatgttgacacatcgtcttac
cattgcaatactgtacgttatgttcccttggagtcactcgacccgtcgctagctcttgga
ttctactgccgggataaagatgactttgatgacttctgcatccgagcaaccaagctagcc
ggagattccaatggcgctccgttgtttacggtgactaaatctcacagaactggtgatcgc
ggaatcgcagaaaccagcactgtgacatgtacttgtgaggagcatgaagatgaatggcaa
ttactttaa
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