KEGG   Brassica napus (rape): 106368533
Entry
106368533         CDS       T04128                                 
Name
(RefSeq) protein transport protein SEC31 homolog B
  KO
K14005  protein transport protein SEC31
Organism
bna  Brassica napus (rape)
Pathway
bna04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106368533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106368533
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bna02044]
    106368533
Membrane trafficking [BR:bna04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106368533
Secretion system [BR:bna02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   106368533
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st WD40 WDR55 Beta-prop_CAF1B_HIR1 TPR_Sec16 Beta-prop_EIPR1 TPR_GEMI5 Beta-prop_EML MIOS_WD40 Beta-prop_DCAF4 EIF3I SRA1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 106368533
NCBI-ProteinID: XP_048597371
LinkDB
Position
A9:complement(38186674..38192981)
AA seq 1099 aa
MACIKGVGRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDDRELTLVGE
IPSSERFHRLAWGKNGSGSEEFSLGLIAGGLVDGNIDLWNPLSLIGSQSALVGHLSIHKG
PVRGLEFNALAPNLLASGADDGEICIWDLAKPSEPSHFPLLKGSGSATQGEISFISWNRK
VQQILASTSYNGTTAIWDLRKQKPIINFADSVRRRCSVLQWNPDIATQIMVASDDDSSPT
LKLWDMRNTMSPVREFTGHQKGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELP
AGNNWNFDVHWYPKIPGVISASSFDGKIGIYNIEGCSRYGAEENNFSTAPLRAPKWYKRP
VGASFGFGGKLVSFHAKAPPKGASSIPSEVFLHSLVTEQSLVSRTSEFETAIENGDKTSL
RGVCEKKSEETESEEEKETWSLLKIMFEEEGTTRTKLISHLGFSLPSVEKDHAVDGLSSD
LNGIGLEDTAPEPVKINEAAAFAMDNGEDFFDNFPSKPDTPVSTSSKDFMLPETDSSAKV
EETQEIPEEEEEDSDKVFDDAIQRALVVGNYNEAVDQCISANKMADALVIAHVGGTSLWE
STREKYLKTSGAPYMKIVSAMVNNDLTSLIYTRSLKFWKETLALLCTFAQGEQWASLCDV
LASKLLAAGNTLAAVFCYICAGNVDRTVEIWSRSLANDRDGRSYAELLQDLMEKTLVLAL
ATGNKKFSASLCKLFESYAEILASQGLLTTAMKYLKVLDSGGLSPELSILRDRISLSSEP
ETNTAASGTQLQSTIPYNQEPTQAQPNVLSNPYDNQYQQPYTDSYVGGYVPSASHAPMQQ
STMFMPHQAQPAPQPSYPPAPASNAQPSMRTTFVPSTPPALKNADQYQQPFVGFHSFTGP
SNNAYPVPPAPNSYVPPGPSQVGQNLNPMMPQAVAPGAGAIGFTPMSAPGVAPRSVIGSV
QPASPLTQQATPAPAAPLPTVQTADTSNVPAHQKPVIATLTRLFNETSEALGGARANPSK
KREIEDNSRKLGALFVKLNSGDISKNAADKLAQLCHALDSHDFGAALQLQVLLTTSEWDE
CNFWLSTLKRMIKARQSVR
NT seq 3300 nt   +upstreamnt  +downstreamnt
atggcttgcatcaagggggtgggcagatccgcctccgtggcgctggctcccgatgctcct
tacatggccgccggaaccatggccggagcggtggacctgtcctttagctcttccgccaat
ctcgagatcttcaagctcgattttcagtccgacgatcgcgagttgacgctggtcggggaa
atccccagctcggagcggttccacagactcgcgtgggggaaaaatggatctggatccgag
gaattctcgttgggccttatcgccggcgggcttgtcgatgggaatatagatctgtggaat
cctctctctttaatcggttcccagtccgcactcgttggacatctatcaattcacaaagga
cctgttcgtggacttgagtttaatgcactcgccccaaatctactcgcctctggggctgat
gatggtgaaatttgcatttgggatttagctaagccttcggagccttctcattttccactt
ctcaagggtagtggttccgccacgcaaggtgaaatctcatttatatcgtggaatagaaaa
gttcaacagatattagcatctacctcctacaatgggactactgcaatatgggacttgagg
aagcagaagcctattattaactttgcagattcagttcgtcgccggtgctctgttttacaa
tggaaccctgacattgctactcagattatggttgcttcagatgacgacagctcacctact
ctcaagctctgggacatgagaaacacaatgtcacctgtgcgcgagtttactggacaccaa
aaaggtgtgattgcaatggagtggtgtccgagtgacagttcatatcttcttacctgtgct
aaggacaaccgaactatttgctgggacactaatacagcagagattgtggctgagttacct
gctggcaacaactggaattttgatgttcattggtacccaaagattcctggagttatatca
gcatcttcatttgacgggaaaattggcatctacaatatcgagggttgcagtcgctatggt
gctgaagagaataatttcagtactgctcctttaagagcaccaaaatggtataagcgcccg
gttggtgcatcttttggatttgggggaaagcttgtatcgtttcacgcaaaggctcctccg
aagggggcctcaagcattccgtctgaggtgtttttgcacagcctggtaactgaacagagt
ttggtgagtcgaacttctgaatttgaaaccgccatagaaaatggagataaaacttctcta
aggggtgtatgtgagaagaaatctgaagagactgaatccgaagaggagaaggagacatgg
agcttgctgaaaatcatgttcgaagaggaaggaacgacaaggacaaagttgatcagccat
cttggctttagtttaccttctgtggaaaaggatcatgcagtagatgggctctcgtcagat
ctgaatggcattggattagaggatactgcacctgagcctgtgaaaattaacgaggcagct
gcatttgctatggacaatggagaagactttttcgacaactttccttctaaaccggataca
cccgtatctacatcctctaaagattttatgcttcctgagacagattcttctgccaaagtg
gaagaaactcaagaaataccagaagaagaggaagaagattctgacaaagtatttgatgat
gccatccagcgtgctttagttgttggaaattacaatgaagcggtggatcagtgtatatct
gcaaataagatggctgatgctttagttatagctcatgttggtggtacatcattgtgggag
agtactcgtgagaaatatttgaagacgagtggtgcgccttacatgaagattgtttctgcg
atggtgaacaacgatctcacgagccttatctatacaaggtcgcttaagttctggaaagaa
actcttgctcttctctgtacttttgcacaaggagaacaatgggccagcctttgcgatgtc
cttgcctcaaagttgctggctgctggtaacactttggctgcagttttctgctacatatgc
gcaggcaatgttgacagaacagtagaaatttggtcgaggagccttgcaaacgatcgcgat
ggaagatcttatgccgagcttcttcaagatcttatggagaagactcttgtccttgctttg
gcaactggcaacaaaaagttcagcgcatctctatgtaaactatttgagagttatgctgag
atattggccagccaagggcttcttacaacggcaatgaagtacttgaaagttcttgattct
ggtggcttgtcacctgaactttccatattacgcgaccgtatttctctttcttcagagcct
gagactaacactgcagcttcaggcactcagcttcaaagcaccataccgtataatcaggag
ccaactcaggcgcaaccaaacgttcttagtaacccatatgataatcagtatcagcaacca
tacactgattcttatgtcggaggatatgttccctcagcttcacatgcgcccatgcagcaa
tcaaccatgtttatgcctcaccaagctcagccagctccgcagccgtcttatcctccggct
cctgcaagcaatgctcagccatccatgagaaccacttttgttccttcaactccccctgca
ctgaagaacgcagaccaatatcagcagccattcgttggttttcattcgttcacgggacca
tccaacaatgcataccctgttccccccgctccaaattcatatgtacctcctggcccctca
caagttgggcaaaatcttaacccaatgatgccccaagccgttgctccaggagctggagcc
ataggatttacgcctatgtcagctccaggagttgctccaagatctgttataggttctgtg
caaccagcaagtcctctaacgcagcaggcgacccctgcccctgcagctccgctaccaact
gttcagactgcagatacttcaaacgtcccagcccaccaaaaacctgtgatagcaacattg
acaaggctattcaatgaaacatcggaagcactgggaggcgcacgtgcaaatccttccaaa
aagcgtgagatagaagacaactcaagaaaattaggtgctctgtttgtgaaactcaatagc
ggagatatctccaagaatgctgcagacaaactcgcgcagctctgccatgctctggacagt
catgacttcggtgcagcccttcagctgcaggtacttctgacgaccagcgaatgggatgaa
tgcaacttctggctgtcgacgctaaagcggatgatcaaggccaggcaaagtgtgcgatga

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