Brassica napus (rape): 106368672
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Entry
106368672 CDS
T04128
Name
(RefSeq) monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
bna
Brassica napus (rape)
Pathway
bna00740
Riboflavin metabolism
bna00790
Folate biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01240
Biosynthesis of cofactors
Module
bna_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
106368672
00790 Folate biosynthesis
106368672
Enzymes [BR:
bna01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
106368672
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
106368672
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Gene cluster
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
106368672
NCBI-ProteinID:
XP_013664138
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Position
A9:complement(39555327..39557897)
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AA seq
480 aa
AA seq
DB search
MASLNLRCDSTHLLPSRHVTRTRPFRKTWMCPKIIPRRLNNVRMGVMMSEEGDAFSSSSS
KSNNGSMGIELQPDLVSFGTLAAEMIPTTMVSSEVEDEEFDLDRPTDGFASIPQAIEDIR
QGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFVVKHGTGIVCVSMKGEDLERLELPLMV
TRKENEEKLRTAFTVSVDAKNGTSTGVSARDRAQTILALASKDSKPQDFNRPGHIFPLRY
REGGVLKRAGHTEASVDLTVLAGLEPVSVLCEIVDDDGSMARLPRLRQFAQENNLKIISI
ADLIRYRRKRERLVEFTAVAPIPTMWGPFKAYCFKSLLDGVEHIAMVKGEVGDGKDVLVR
VHAECITDDIFGNGSGGKQLAIAMRQIEETGRGVFVYLRGPEAKGIDLTHKPRTYDNASD
QTEGVSFPVASREYGIGAQILRDLGVRTMKVMTNNPAHYVGLKGYGLSITGKVPLISPSS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctcaatcttcgatgcgactcaacgcatcttcttccctcgcgtcatgttacg
aggacaagaccgtttaggaagacatggatgtgtcctaagatcataccaaggagattaaac
aatgttagaatgggagtgatgatgtctgaggaaggagatgccttctcttcctcctcctcc
aagagtaataatggatcaatggggatcgagttgcagccggatttggtttctttcggaacg
ttagcagcagaaatgattcccacgacaatggtttcgtctgaagttgaggatgaagagttt
gatcttgatcgtcctactgatggatttgcatctattccgcaagctattgaggatattcgt
cagggcaagttggtgattgttgtggatgatgaggatagagagaatgaaggagatttgata
atggctgcatcgttggtgacacctgaagctatggcttttgtggtgaagcatgggactgga
atcgtgtgtgtgagtatgaaaggtgaagacttggagaggttagagcttcctttaatggtg
acgcggaaggagaacgaggagaaactccgcacggccttcacggtttctgtggatgctaag
aacggaacatcgacaggtgtctcggctcgtgacagggcgcagacgatattagcacttgca
tcaaaagattcgaagcctcaggatttcaaccgtcctggtcatatctttcctttgagatac
agagaaggcggtgttcttaaaagagcagggcacacagaagcctctgttgatctaactgtg
ttagctggtttggaaccagtttctgttttgtgtgagattgtagatgatgatggttccatg
gctaggttaccaagactccgccaatttgctcaagagaacaatttgaaaatcatctcaatc
gccgatctaatcaggtaccgaaggaaaagagagagactggtcgagtttactgcggtggcg
cctataccgacaatgtggggaccatttaaagcatactgcttcaagtcattacttgatgga
gttgagcacattgcaatggtcaaaggagaagtcggagatgggaaggatgttctggtgaga
gtacacgcggaatgtatcacagatgatatatttggaaacggctctggtgggaagcaatta
gcaatcgctatgagacagattgaagaaactgggagaggtgtgtttgtctacttacgtggt
cctgaagctaaaggcattgacctaacacacaagcctcgtacttacgacaacgcttctgac
caaaccgagggtgtttcattccccgttgcttcaagagaatacggcattggagcacaaata
ctgagggatcttggagttagaacgatgaaggtgatgacgaataatccagctcattatgtt
ggacttaaaggctatggtttatcaatcaccggtaaggttccactcatcagtcccagctcc
taa
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