Brassica napus (rape): 106368831
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Entry
106368831 CDS
T04128
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106368831
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bna04812
]
106368831
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
106368831
Cytoskeleton proteins [BR:
bna04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
106368831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
PDS5
HEAT_2
Cnd1
Tti2
INTS1_R4
TTI1
Adaptin_N
HEAT_Maestro
UTP20
MMS19_N
HEAT_DAAF5
TPR_TTI1_C
MMS19_C
Sec7-like_HUS
TPR_TTI1_N
Dopey_N
Npa1
SEN1_N
API5
Motif
Other DBs
NCBI-GeneID:
106368831
NCBI-ProteinID:
XP_013664342
LinkDB
All DBs
Position
A9:complement(7281345..7288655)
Genome browser
AA seq
1434 aa
AA seq
DB search
MEEALEMARAKDTKERMAAVERLHQLLEASRKSLSPSEVTSLVDSCLDLLKDTNFRVSQG
ALQALASAAVLAGEHLKLHLNALVPAVVERLGDSKQPVRDAARRLLTTLMEVSSPTIIVE
RAGSYGWMHKSWRVREEFARTVTSAIGLFASTELPLQRVILAPILQMLNDPNQAVREAAI
LCIEEMYMQGGSQFREELQRHHLPSYMVKDINARLERIEPQQRSTDSHHHVVNEIKASNV
NPKKSSPRAKTSTRENSLFAGDADITEKPIEPITVYSEKELIREFEKVASTLVPEKDWSL
RISAMRRVEGLVAGGATDYSCFRGLLKQLVGPLSTQLSDRRSTIVKQACHLLCLLSKELL
GDFEACAEIFILVLFKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIAESAKHDRNAV
LRARCCEYALLTLEHWPDAPEIQRSVDLYEDLIRCCVADAMSEVRATARMCYRMFAKTWP
DRSRRLFSSFDPVIQRLINEEEGGIHRRHASPSVRERHSQPSFSQTSAPSNLPGYGTSAI
VAMDRSSNLSSGGSLSSGLLLSQSKDLNKGSERSLESVLQSSKQKVSAIESMLRGLHVSD
RQNPAALRSSSLDLGVDPPSSRDPPFHASSAASNTLKNSTTAESMPSINRGSNRSGGLGL
SDIITQIQAAKDSGRQSHRGNLLSESHPSFSSLTAKRVSERNERSCFEDNNDSREARRFM
VGHLDRQQIDYSYRDLNASHVPNFQRPLLRKNAGGRMSAGRRRSFDDSQLQVGDMSNHVD
GPASLNEALNDGLNSSSDWSARVAAFNFLQTLLQQGPKGAQEIIQNFEKVMKLFLRHLDD
PHHKVAQAALSTLADLIPSCRKPFESYMERVLPHVFSRLIDPKEVVRQPCSSTLEIVSKT
YSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNRYAGNPEISGNSGILKLWLAKLTPL
TRDKNTKLKEASITCIISVYNHYDSTGLLNYILSLSVEEQNSLRRALKQYTPRIEVELLN
YMQSKKEKQRIKSYDPSDAIGTSSEEGYPGASKKNIFLGRYSGGSVDSDSGSGRKWSSSQ
ETTTVTGGVVGQSVSSGTQEKLYHNFRSGISSASDLLNQKDSDYTFTPAGENLIRTSPNG
SSDNVENLDGLSPQHLDKNGLNMTNADSLEERHGDAVSRDLDLTHYMLSSIKVNPTPESG
PSIPQILHMINGSDGSPSSSKISGLQQLIEASVANEESVWTKYFNQILTVVLEVVDDEDF
SVREVALSLISEMLKSQKDAMEDSVEIVIEKLLHVSKDSVPKVSGEAEQCLTTVLSQYDP
FRCLSVIVPLLVTEDEKTLVACINCLTKLVGRLSQEELMDQLSSFLPAVFEAFGNQSADV
RKTVVFCLVDIYIMLGKAFLPHLEGLNSTQVRLVTIYANRISQARTGAPIDSNT
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctctggaaatggcgcgagccaaggacaccaaggagcgcatggcggcggtg
gagcggcttcaccaactcctcgaagcttctagaaagagcctgagtccatcggaagtgacg
tcgctggttgattcttgtctggatctcctcaaggacaccaatttcagagtctcccagggc
gcgctccaggctcttgcttccgccgccgtgctcgccggggagcatctgaagcttcacttg
aacgcgctcgtgcctgccgtcgtggagaggcttggcgacagcaagcaaccggttagggat
gcggcgaggcgtttgttgacaactctaatggaggtttcgtctccgacgattatagtggaa
agagcaggttcgtatgggtggatgcataagagttggagagtgagggaagagttcgcgcgt
actgtcacgtctgccattggtctctttgcatccaccgaactccctctccagcgtgttatt
cttgctccgatacttcagatgttaaatgatccgaatcaagctgttagggaagctgcaatt
ctgtgcattgaggagatgtacatgcagggtgggtctcagtttcgtgaggagcttcagcgc
caccatcttccatcatatatggtaaaggatattaatgctagactggaacgtattgagcca
caacagcgttctacagatagccatcaccatgttgttaatgagattaaggcatcaaatgtc
aatcccaagaaaagcagtccgagagcaaagacttccactagggagaactctttatttgca
ggagatgccgacatcaccgaaaaacccatcgagccaatcacagtgtactcagagaaggag
ctgatacgagaatttgagaaagttgcttcaacacttgtcccggagaaagactggtcattg
cgtatctcagctatgcggagggttgaaggactcgttgcaggaggtgcgactgactactct
tgttttcgaggtcttctgaagcaacttgttggtcccttaagtacacaattatctgaccgg
cgatctaccattgttaagcaggcttgccatctcttgtgtctcttatcaaaagagctactg
ggtgattttgaagcatgcgctgagatttttattctagtacttttcaagctggttgtgata
actgtgcttgtaattgcagaatctgctgataactgcataaaaacgatgctgcgtaactgc
aaagctgcccgtgtacttcctcgcatagctgagtcagcaaagcatgaccgtaatgcagtt
ctgcgagcaaggtgttgtgaatatgcactattaacactcgaacattggcctgatgctcca
gaaattcagcggtcagttgatttatacgaagatctgattagatgctgtgttgcagatgct
atgagtgaggtacgggcaactgctagaatgtgctacagaatgtttgcaaaaacttggccg
gatcgttctcgtcgtttattttcctcctttgaccctgtcattcaaaggctaataaatgaa
gaagaaggtggaattcataggagacacgcctcaccatctgtccgtgagagacactcccag
ccttcattttctcagacgtctgctccatctaatttacctggctatggaacatcagccata
gtcgctatggatagaagttcaaatttgtcctcaggaggatctctttcttctggcctactc
ctatcccaatcaaaggatctcaataaaggttctgaacgtagtctggaaagtgtgttacag
tcaagcaagcagaaggtcagtgcaattgaaagtatgctccgaggactgcatgtatccgat
agacaaaatcctgcagcccttcgttcgagtagtttggatctaggagttgaccctccatcg
tcccgtgatcctccattccatgcctctagtgcagcatccaatactctcaaaaatagcaca
actgctgaatcaatgcctagtattaacagaggcagtaatcgcagtggtggccttggtttg
tcagatatcatcacccaaatacaagcggcgaaggactcaggaagacaatcacaccgtggc
aatctgttgtccgagtctcatccgagcttttcatccttgacagctaaacgggtctcagag
agaaatgaaagaagttgttttgaggacaacaacgattccagggaggctaggcggtttatg
gtgggtcatttagacagacagcagattgattactcttatagagatttgaacgctagccat
gttcccaatttccagaggccacttttgagaaagaatgctggtggaagaatgtcggcaggc
aggaggaggagtttcgatgatagccagctgcaagttggtgacatgtcaaatcatgttgat
ggtccagcgtctctaaacgaggcccttaacgatggattgaattcaagttctgattggtcc
gccagagttgcagctttcaattttctccaaactttgctgcaacaaggcccaaaaggtgct
caagaaataatccaaaattttgagaaagtaatgaaactatttctccggcacttggatgat
cctcaccacaaggttgcacaagcagcactgtcgacactcgcggatcttataccatcttgc
cgaaaaccttttgagagctacatggagagagtcttaccccacgtgttttcaaggctaatc
gatccaaaagaggtagttagacagccttgttcgtcaaccttggaaatcgtcagcaaaacc
tacagtgtagattcccttttacctgcgttgcttcgttcactggatgagcagagatcacca
aaggctaaattagctgtgattgaatttgccatcaactccttcaacaggtacgctggtaac
cctgaaatttcgggtaatagtggcatcctgaagttatggctagcaaagttgacaccattg
acccgcgacaaaaataccaagttaaaagaagcttccattacttgtatcatatctgtctac
aatcactatgattctacaggacttctaaattacattcttagtttgtcggttgaggagcaa
aactccttgagaagagccctcaaacaatatactccccgcatcgaggtggagctattaaat
tatatgcagagtaagaaggagaaacaaagaataaagtcttatgacccatctgatgccatt
gggacatcatctgaagaaggttatcccggtgcttccaagaagaatatattccttggcagg
tattctgggggttctgttgacagtgatagtggtagtggtaggaagtggagttcttcccag
gagacgacaacggtcactggtggtgttgttggtcaaagtgtttccagtggaactcaggaa
aaactatatcacaacttcagaagtgggataagttctgccagtgatttgttgaaccaaaag
gattctgattatacgtttactccagctggtgagaatttgataagaactagccctaatgga
agctcagacaacgttgaaaatttggatggcttatctccacagcatttggacaaaaatggt
ctgaatatgacaaacgctgattccttggaagaaagacatggagatgcggtctcccgcgac
ttagatttgactcactacatgctctcatctattaaggttaacccaacaccggaatctgga
cctagtattcctcagattctacatatgatcaatgggagtgatggaagcccttcttcgagc
aagatatctggactccagcaattaattgaagcctctgtagctaacgaggaatcagtttgg
accaagtatttcaatcaaatattgacggttgttcttgaagtggtcgatgacgaagatttt
tcagtcagagaagttgctctttcgctgatttctgaaatgctaaagagccagaaagatgcc
atggaagattcggttgagatagtgattgagaagctgcttcatgtctcgaaggactctgtt
ccaaaagtttccggtgaagctgagcaatgcttgaccacagttttgtcccaatacgatcct
ttcagatgcttaagtgttattgtgccactattggtaacagaagatgaaaaaactctcgtc
gcttgcatcaattgtttaactaagcttgtgggtaggctctcgcaagaggaattaatggat
caattgtcttcttttttgcctgccgtttttgaagcatttgggaaccaaagcgcagatgtt
cgaaagacagtggtgttctgtctggtggacatatatataatgcttgggaaagcgttttta
ccgcatttggaaggtctaaacagcacacaggttcggttagtgaccatctacgcaaacagg
atctcacaggctagaactggtgcccctatagactcaaacacgtaa
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