Brassica napus (rape): 106368833
Help
Entry
106368833 CDS
T04128
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106368833
03460 Fanconi anemia pathway
106368833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106368833
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106368833
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
106368833
FA (Fanconi anemia) pathway
Downstream FA components
106368833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
Motif
Other DBs
NCBI-GeneID:
106368833
NCBI-ProteinID:
XP_048595618
LinkDB
All DBs
Position
A9:7274743..7280769
Genome browser
AA seq
945 aa
AA seq
DB search
MVSPTSLSKSEEKETLNPRNVYHIGGLQVRFPYQPYGTQLAFMSRVISTLDRAQRDGRCH
ALLESPTGTGKTLSLLCSVLAWQQSYASRFPKGNSAHKRSHFTPDVTRPPPSTEPSDVVE
VEKPPRVPTIFYASRTHAQITQVIREYRKTAYRVPMAVLGARKRSCTNRRVQGKPNLDEI
CRCLIKDRNKPKCPEFRGKDDIVAHPSLQQNEVHDIEDLVKIGYAVRGYTFGFTVHSNME
DIAREAGSIDLGEETLFKLQSELQLLSLAIPMIYQPVCDAIDGLISWIGSRKDSLAKRDP
QHYFSSWTGDKALRELEESNITRKGFRNLSNCFIEAIERSMKEIPPHLSGIFVSTLQELL
VTLGYFFSRDGSHSHTLDYELGLQRFIKRGDSSGKWTHTLSLWCMNPSVVFKAIVDLSSS
IILTSGTLSPMDSFSSELGMQFGACLEAPHVVDANQQVWAAGIFSGPNNQPLNASYKTND
EHPFQDALGKSLEEICSIVPGGSLVFFPSYKLMGKLCTRWRETGQWSRLCLEKDIFIEPS
GGATGEFENVLKGYYDCIGGKKRFIGRNRRAAFLAVCRGKVSEGLDFSDDNARAVIIVGI
PFPNLHDVLVGLKRSYNDTYKSSRNLLGGGEWYCQQAYRALNQAAGRCIRHRFDYGAIIF
LDERYRQQRNRVSISKWLRQSIKLYDNFEESMQDLKSFFPRAKKHVDSKMLSYKEVIDLE
CVVQTEPETSFLINSGSSASSPFSCSSGLTLERGGPPSVSSHALKRRKFISSAAVIDLEK
ENNHDMITRRIEFGSDSSTETRARVQISCLLCRSPLGHPDNNGSSYLNCLVTWSSKKYVL
TLLKETSRSEMPTSVSVIVTDCSSVDQRLCTKDEGIWCEEDGCVFNTIFCPFCSVPNTTC
LGVQIVATDSSNVQFLSKILFFADHLNVMGDAAIKETLLEHQGTC
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggtttccccaacaagcttaagcaaatcagaagagaaagaaaccctaaaccctagaaac
gtgtaccacatcggaggactccaagtgagattcccttatcagccgtacggaacacagcta
gctttcatgagccgtgtcatatctacccttgatagagcccagagagacggtagatgccac
gcgcttctcgagtcccccactggcactggcaaaactctttcattgctctgctcggttctc
gcttggcaacagagctatgcatcgcgctttcctaaaggaaactcggctcataaaagaagt
catttcacacctgacgtcacacgaccaccaccctcaacagaacctagcgatgtggtggaa
gtcgaaaagcctccaagagttcctaccatattctatgcttcacgaacgcatgctcagatc
actcaagtcattcgtgagtatcgcaaaactgcttacagagtgcccatggctgtattgggt
gcacgtaaacgttcatgcaccaaccgtcgtgtacaggggaaacctaatttagacgagata
tgccggtgtctcataaaagataggaataaaccaaaatgtcccgagttcagaggcaaagat
gatattgtagctcacccatcacttcagcaaaatgaagttcatgatattgaagatcttgtc
aaaattggatatgctgttagaggttatacgtttggttttacagttcacagcaatatggaa
gacattgctcgtgaagcaggcagcattgacttgggagaagagactcttttcaaattacag
agtgaactacaacttctaagcctggcgatcccaatgatatatcaacccgtgtgtgatgct
atagacggattgataagctggattggaagcagaaaggactccctagcaaaacgtgatcct
caacactatttctctagctggaccggagacaaagctttaagggagctagaggaatctaat
atcactcgaaaaggcttccggaacttatcgaactgcttcattgaggcaatcgaaagatca
atgaaagaaatacctcctcatttgagtgggatatttgtctccacactacaagagttgtta
gttacacttggatacttcttttcaagagatggaagtcacagtcacaccctagattacgaa
ctgggtttacaacgctttattaaaagaggagattcttctgggaagtggacgcatactttg
agtttgtggtgcatgaatccatctgttgttttcaaagctatcgttgatctttcttcatcc
attattttaacatctgggactttgtcaccaatggactctttctcatctgaacttgggatg
cagtttggcgcttgtttggaggctccacatgtggttgatgctaatcagcaggtgtgggct
gctggaatcttcagtggtcctaataatcaacctctaaatgcaagttataaaacgaatgat
gaacatccgttccaggatgctctagggaaatcattggaagagatttgctctattgtgcca
ggtggctctctcgtcttctttccaagctataagcttatgggaaaactctgtacccgttgg
cgagaaactggtcaatggtctcggctctgcttggaaaaagacatttttattgagccaagc
ggaggagcaacgggggaatttgagaacgtcctgaagggatattatgattgtataggcgga
aagaagagattcattggaagaaataggagagcagcatttcttgctgtatgtagaggaaag
gtttctgaagggcttgattttagtgatgacaacgccagggctgtgataatcgttggcatt
ccatttccaaacttgcatgatgtcctagtcggactaaagagaagttataatgatacgtac
aaatcatctagaaaccttcttggagggggtgaatggtattgccaacaagcgtatcgtgct
ttaaatcaagcagcagggagatgtatcaggcataggtttgattatggtgccatcatattt
ttggatgagagatacagacaacaaaggaacagagtgtctatttcaaagtggctaagacag
tctatcaaactgtatgataattttgaagaatctatgcaagacttgaaatcattttttccc
agagccaagaagcatgttgacagtaagatgttaagctacaaagaagtcatcgaccttgag
tgtgtggtccaaactgagcctgaaacatcttttttgatcaatagtggtagttcagcatcc
agtccattttcttgctccagtggtttgactctagaacgaggggggccaccgagtgttagt
tcccatgctttgaagagaagaaagtttatcagctctgcagccgttattgaccttgaaaaa
gaaaacaaccatgacatgatcacaaggagaattgagtttggatctgacagcagcactgaa
acaagagctagagtgcagatatcttgtttgctctgtagaagccctttaggccacccagat
aataacggctcttcatatctaaattgcttggtgacttggtcgtccaagaagtatgtactg
actctcctgaaagaaacatcaagatctgaaatgccgacaagcgtttcagttatcgtgaca
gattgctcctcggttgaccagagactctgcacaaaagatgaggggatttggtgcgaggaa
gatggatgtgttttcaacactatcttctgccctttctgcagtgtcccaaacacgacgtgt
ctcggagtgcaaatcgtggctactgattcatcaaatgtccagtttctcagcaaaatattg
ttctttgctgatcatctaaatgtcatgggtgatgctgcaatcaaggaaacgttgttggag
caccaaggtacttgctag
DBGET
integrated database retrieval system
