Brassica napus (rape): 106369001
Help
Entry
106369001 CDS
T04128
Name
(RefSeq) probable galacturonosyltransferase 6 isoform X2
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106369001
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
106369001
Enzymes [BR:
bna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
106369001
Glycosyltransferases [BR:
bna01003
]
Polysaccharide
Structural polysaccharide
106369001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
CitG
Motif
Other DBs
NCBI-GeneID:
106369001
NCBI-ProteinID:
XP_013664549
LinkDB
All DBs
Position
A10:2973320..2976683
Genome browser
AA seq
601 aa
AA seq
DB search
MNQIRRWQRILFLSLLSISVLAPLVFVSNRLKTITPFSRREFIEELSNFRYRTSDLRLNA
VEHEDGEGLKGPRLILYKDGEEFNSSVSDEKEKTIDLPNIDDGNNHKYSEEKVIDSQLTK
LSSDSKDKILTVNQLANKTEFKPPLSKGEKNTKVHQSDRATDMKIKEIRDKIIQAKAYLN
YAPPGSNSQIVKELRTRMRELERAVGDVTKDKDLSKGALRKLKPLEATLYKASRVFNNCP
AIATKLRAMNYNTEELVQAQKNQASYLMHLAARTTPKGQHCLSMRLTSEYFALDPEKRQM
PNQEKFNDPSLNHYVVFSDNVLASAVVANSTISSSKEPEKIVFHVVTDSLNYPAISMWFL
LNIQSAAAIQIQNIDDMDVLPLDYDQLLMKQNSNDPRFISTLNHARFYLPDIFPGLNKMV
LFDHDVVVQRDLSRLWSIDMKGKVVGAVETCKEGEPSFHSMSTFINFSDAWVSGKFSPKT
CTWAFGMNLVDLEEWRRRKLTSTYIKYFNMGTKRPLWKAGSLPIGWLTFYRQTIPLDKRW
HVMGLGRESGIKTVDIEQAAVIHYDGIMKPWLDIGIDKYKRYWNRHVPFYHSYLQQCNIH
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaattcgtcgatggcagaggattctcttcctctctctgctatcgatctccgtg
ttggctcctctcgttttcgtctcgaatcggcttaaaaccatcactccctttagtcggaga
gaatttatcgaagaattatccaacttcagatacaggactagtgaccttaggcttaacgct
gttgaacatgaggatggagaaggcttgaaggggccaaggctcattctctacaaggatggg
gaggagtttaattcttcagttagtgatgagaaagagaaaactatcgatttaccaaatatt
gatgatggaaataatcataaatacagtgaagagaaagtaattgattcacagctgacgaaa
ctaagctctgattccaaggataaaattctaacagttaaccaacttgctaataaaacggag
ttcaaacccccattatccaagggtgaaaagaacacaaaggttcatcagtctgatagagcg
acagatatgaagataaaggagatcagagacaaaattatacaagccaaggcctacctgaat
tatgccccgcctggaagtaattctcagattgtgaaggagttgagaacaaggatgagagag
ctggaacgggctgttggtgatgtgactaaggataaagatttgtcaaagggcgcgcttcgt
aagttgaagccactggaagctacattatacaaggctagtcgtgtctttaacaattgccct
gccattgctaccaaactccgtgccatgaattataacacagaagaactagttcaggcgcag
aaaaatcaagcatcatatctaatgcaccttgctgcaaggaccaccccaaaaggtcaacac
tgtctctccatgcggttgacgtccgagtactttgccttggatcctgaaaaaaggcagatg
cctaaccaggaaaagttcaatgatcctagtctcaatcattatgttgtcttctctgacaat
gtgttggcttctgcagttgttgctaactctacaatatcttcttcaaaggaaccggaaaaa
atagtattccacgtcgtgactgattcacttaattacccagcaatctcaatgtggtttttg
ctaaacatccaaagtgcagctgctatccaaatccaaaacattgatgatatggatgtcctg
cctttagattatgatcagttgctgatgaagcaaaactccaatgacccaagattcatctct
accctcaatcacgcacgcttctacctcccggatatattcccggggttgaacaagatggta
ctctttgaccatgatgtagttgttcaacgagatttaagtagactatggagcattgatatg
aaagggaaggtggttggtgctgtagagacttgcaaagaaggtgaaccttcattccattca
atgagcacatttattaatttctcagacgcatgggtctctgggaaattcagtcctaaaact
tgcacgtgggcgtttgggatgaatctagttgatctcgaagaatggagaagacggaagttg
acttctacatacataaaatacttcaacatgggaacaaaaagacctttgtggaaagctgga
agcttaccgatagggtggttgactttctataggcaaacaataccgttggacaagagatgg
catgtgatggggttaggtcgcgagtcaggcatcaaaacggttgacattgaacaagccgcg
gttatacactacgatgggatcatgaagccctggttggatatcggaatagataaatacaaa
cgttactggaacagacatgtcccgttctatcactcctacttgcaacagtgcaacattcac
gcttga
DBGET
integrated database retrieval system
