Brassica napus (rape): 106369044
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Entry
106369044 CDS
T04128
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106369044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106369044
03012 Translation factors [BR:
bna03012
]
106369044
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106369044
Translation factors [BR:
bna03012
]
Eukaryotic type
Release factors
106369044
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
G-alpha
MMR_HSR1
EF-G_D2
Tub
Motif
Other DBs
NCBI-GeneID:
106369044
NCBI-ProteinID:
XP_013664596
LinkDB
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Position
C8:44800511..44805586
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AA seq
528 aa
AA seq
DB search
MDLEADIRALQLDSAEENNGVVIPEAHNSDEVEKLDTSEEDLKDKVEESAPVPDEQQASE
DHDQEVHHAVHNPAKAKEKAAQEKAAKEEAEEEAEANKKRHLNVVFIGHVDAGKSTIGGQ
ILFLSGQVDDRQIQKYEKEAKEKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETASTR
FTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVS
KLVVVVNKMDDPTVNWSKERYDEIEQKMVPFLKSSGYNTKKDVVFLPISGLMGFNMDKRM
DPKVCPWFSGPSFFEVLNSIEVPPRDPNGPFRMPIIDKFKDMGTVVMGKVESGSIREGDS
LVIMPNKEPVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILSGFVLSSAVKPVPAVT
EFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIELISQIDVKTRKPMKKKILFVKN
GAAVICRIQVTNSICVEKFSDFPQLGRFTLRTEGKTVAVGKVTALSSA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaggctgacatccgcgcattacagcttgattcggcagaagaaaacaacgga
gttgttatcccggaagctcataactcagatgaagttgagaaattggatacatcagaagaa
gacctgaaggacaaggtggaagagtcagcaccggttcctgatgagcaacaagcttccgag
gatcatgatcaagaagtgcaccatgcagtgcataaccctgcgaaagctaaagagaaggca
gcccaggagaaggctgccaaagaggaagctgaagaagaggcagaagcaaacaagaaaaga
cacttgaacgtggtgttcatcgggcatgttgatgctggaaagtctacaattggaggacaa
attctcttccttagcggtcaggtggacgaccgacaaatccaaaagtatgaaaaggaagca
aaagaaaaaagtagagaaagctggtatatggcttatataatggatacaaatgaagaagag
agggcgaagggcaaaacagttgaagttggaagggctcattttgaaactgcgagcacgaga
tttaccattttggatgctccgggtcacaagagttatgtaccaaatatgatcagcggagca
tctcaagcggacattggtgtactggtgatttcagctcgtaaaggtgaatttgagacggga
tatgagaggggtgggcagacgcgtgaacatgttcaactggcaaaaacattgggtgtgtcg
aaactggttgtcgttgtgaacaaaatggacgatccaactgtgaactggtcgaaagagagg
tacgatgaaatagaacaaaaaatggtaccatttcttaaatcctctggctacaacacaaag
aaagatgttgtcttcttgcctatatctggtctaatggggtttaatatggacaagaggatg
gatccaaaagtttgtccttggttcagtggccctagcttttttgaagtcttgaattcaatt
gaagttccgccacgagatcctaacggcccattcaggatgcccatcattgataaattcaaa
gacatggggactgttgttatgggaaaagtagaatcgggcagcattcgggagggtgattcc
ttggtcattatgccaaataaggaacccgtgaaagttgttgcaatatattgtgatgaagat
aaagttaagcgtgctggaccgggtgagaatttgagagtccgtataactggcattgaggac
gaggatatcctttcaggttttgttttatccagcgcggtaaagcctgtacctgccgttact
gagttcgttgcccaattacaaatcctcgagctgcttgacaacgctatttttacagctggt
tacaaggctattctccacattcatgctgtggttgaggaatgtgagatcatcgaattgata
agccaaattgatgtgaagacgaggaaacccatgaaaaagaaaattctgtttgtgaagaat
ggtgctgctgttatctgccgtatacaggttaccaattcaatctgtgttgaaaaattctca
gatttccctcagcttggaagattcactctacgaactgaagggaaaacagttgcggtggga
aaagtgactgcgctctcaagcgcttga
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