Brassica napus (rape): 106369099
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Entry
106369099 CDS
T04128
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106369099
03083 Polycomb repressive complex
106369099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106369099
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106369099
Histone modification proteins
HAT complexes
HATB complex
106369099
HDAC complexes
Sin3A-HDAC complex
106369099
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106369099
PRC2.2
106369099
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106369099
Heterochromatin formation proteins
Other heterochromatin formation proteins
106369099
Chromatin remodeling factors
NuRD complex
106369099
NuRF complex
106369099
NuRF complex (fruit fly)
106369099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_SPT8
eIF2A
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
106369099
NCBI-ProteinID:
XP_013664656
LinkDB
All DBs
Position
A9:complement(40362369..40365558)
Genome browser
AA seq
506 aa
AA seq
DB search
MESEEAEVAAAGAASPSGGNVTSAPKKRGRKPKSKEESQTQEERGGKMKESGKKTKQEEQ
SVDEKYTQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVP
NTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIIAT
HTDSPDVLIWDVETQPNRHAVLGAATSRPDLILTGHQDNAEYALAMCPTEPFVLSGGKDK
SVVLWSIQDHITTAASTDSKSSGSIIKQTGEGGDKTESPSLGPRGVYHGHDDTVEDVAFS
PTSAQEFCSVGDDSCLILWDARTGTSPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNT
VRLYDRRNLTSNGVGTPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSK
KTDRSAKSPAGLFFQHAGHRDKVVDFHWNAEDPWTIVSVSDDCETTGGGGTLQIWRMSDL
IYRPEEEVLAELEKFKSHVMTCASKP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaggaagcggaagtggcagcggcaggagcagcgtcgccgagcggaggaaac
gtgacatcggcgccgaagaagagagggcggaaacctaagagcaaggaagagtctcagacg
caggaggagaggggtgggaaaatgaaggaaagcgggaagaaaacgaagcaggaggagcag
agtgtggacgagaagtacactcagtggaaaggtctcgtccccattctctacgactggctc
gccaatcacaacctcgtctggccttccctctcttgcagatggggtccacagcttgaacaa
gcaacctacaagaatcgacagcgtctttacctctcagaacaaactgatggcagtgtgccc
aacactctagtcatagcgaattgcgaagttgttaagccaagggtcgctgccgcagagcac
atatctcagttcaacgaagaagcacgttctccatttgtgaagaagttcaagaccatcatt
caccctggagaggttaacagaatcagggaactcccacaaaacagtaagattattgctact
cacaccgacagtcctgatgttctcatttgggatgttgaaacccaaccaaaccgtcatgct
gtccttggagctgctacttcccgtcctgatttgatattaactggacatcaagacaatgct
gaatacgctcttgcaatgtgcccaaccgaaccctttgtcctctctggaggcaaggacaag
tcggttgttttgtggagtatccaggaccacatcacaacggctgctagtacagattccaaa
tcatctggatccatcatcaaacagactggtgaaggtggtgataagactgagagtccttct
cttggcccacgaggtgtatatcatggccatgatgataccgttgaagatgtcgctttcagc
cccactagtgcacaagagttctgcagtgtcggtgacgattcttgccttatactatgggat
gcaagaacaggcactagccctgtcaccaaggttgaaaaggcgcacgatgctgatcttcat
tgtgtcgattggaaccctcatgatgacaatctcatcctgacagggtctgcagacaacact
gttcggttgtatgatcgtaggaatctgacctcaaatggagtgggtacgcctatttacaaa
tttgaaggccacaaagctgctgttctttgcgttcagtggtctcctgataagtcatctgtt
tttgggagttccgcagaagatggtctcttgaacatctgggattatgacagggtcagtaag
aagactgatcgttcggctaaaagtccggctgggctcttcttccagcatgctggtcacagg
gacaaagtagttgatttccactggaatgcggaggacccttggacaattgtcagtgtttct
gatgactgtgagactactggtggaggtggaacactgcagatatggcggatgagtgacttg
atttacagaccggaagaggaagttctggcagaattggagaagttcaagtcgcatgttatg
acatgtgcctccaagccttga
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integrated database retrieval system
