Brassica napus (rape): 106369186
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Entry
106369186 CDS
T04128
Name
(RefSeq) alpha-amylase 1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna00500
Starch and sucrose metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
106369186
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
106369186
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GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
106369186
NCBI-ProteinID:
XP_013664748
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Position
A1:12229954..12233950
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AA seq
423 aa
AA seq
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MACLNAKLLFSFLLVFLPTFTVSTLLFQGFKWESWMKEGGFYNSLHNSINDLSNSGITHV
WLPPPSQSVSPEGYLPGKLYDLNSSKYGSETELKSLIAALKQKGIKAVADIVINHRTAER
KDDHCGYCYFEGGTSDDRLDWDPSFICRGDTNYAGTGNPDTGEDYKPAPDIDHLNPRVQK
ELSEWMNWLKSEIGFSGWRFDFVRGYAASVTKSYVQNTSPDFAVGEKWDDMKYGGDGKLE
YDQEEHRSGLKRWIEEGGGGVLTAFDFTTKGILQSAVGGELWRLKDSQGKPPGLIGIMPG
NAVTFVDNHDTIRPNSWAFPSDKVLLGYVYILTHPGTPCIFYSHYIEWGLKDSISKLVAI
RNRNGIGSTSSVMIKAAEAELYLAMIDEKVIMKIGPKLDIGTLVPPNFVLAYSGLDFAVW
EKK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtctgaatgcaaaacttctcttctctttcctcctcgtcttcctcccaaccttc
acggtttccaccttgttgttccagggtttcaagtgggaatcatggatgaaagaaggagga
ttctacaactctctccacaactccatcaacgaccttagcaactctggaatcactcatgtc
tggcttcctcctccttctcaatccgtttctcctgaagggtacttacctggtaagctatac
gatctaaacagctccaagtacggttcggagacggaactgaagtctttgatcgcagcactg
aaacagaaagggatcaaagctgtggctgatattgtgatcaaccacagaacggctgagagg
aaagacgatcactgtgggtactgttatttcgaaggcgggacttccgatgatcgtttagat
tgggatccttccttcatctgtcgtggcgatactaactacgcgggtactggaaaccctgac
accggggaagattataagccggccccggacatcgaccaccttaaccccagggttcagaaa
gagctgtcggaatggatgaattggctcaagtctgagatcggattcagtggttggagattc
gattttgttagaggctatgcagcttccgtcaccaaatcatacgtacagaatacttcaccc
gattttgcggttggtgagaaatgggacgatatgaagtacggaggagatggtaaactggag
tatgatcaggaggagcatcgctcgggtcttaaacgctggatcgaggaaggtggtggtggt
gtactgacagcttttgatttcacgaccaaagggatcttacagtctgcagtaggaggtgag
ctttggaggctaaaagactctcagggaaagccacccggtcttatcggaatcatgcccgga
aacgcagtgacgttcgtagataaccacgacactatcagaccaaactcgtgggcttttcct
tcggataaagtcttgcttggatacgtttatattcttactcaccctggcaccccttgcatc
ttttatagccattacatcgaatggggtctaaaagatagtatctcgaagttggtggcgatc
aggaatagaaatggtattggtagtacaagctctgttatgatcaaagcggccgaggcggag
ctctacttggctatgattgatgaaaaggttatcatgaagattgggccaaaactggatata
ggaactctcgttcctccaaattttgttttagcttattcaggtcttgattttgctgtatgg
gagaagaagtga
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