Brassica napus (rape): 106369234
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Entry
106369234 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106369234
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106369234
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106369234
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106369234
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106369234
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106369234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Ribosomal_L37ae
Motif
Other DBs
NCBI-GeneID:
106369234
NCBI-ProteinID:
XP_048597912
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All DBs
Position
A9:44124984..44128244
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AA seq
881 aa
AA seq
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MGKKAKKKAQTKENLNQTKNLSEQPSEVAEEAVKEKQACVHFDKGLNLDKVLDKIKSSQV
IKCHECKEGAKAKGSNKGKHKAIWVCLECGCYVCGGVGLPTLPQSHVLKHIRSTRHRLVI
QWENPQLRWCFPCNSLLPNGEKKDALLEVVKLMKERSLNSLAPSSSDDAEGSGSMSITSD
IVTIGVEARDGYVVRGLVNLGNTCFFNSIMQNLLSLDQLRCHFLKEDVSGVGLPLASSLR
KLFAEMKPEAGLKSVINPRAFFATFCAKAPQFRGYDQHDSHELLRCLLDSLSTEESAWRK
RRGGVCDDDEKATTTTTTLVDSVFGGETSSIVSCIECGHSSKIYEPFLDLSLPVPFKKTP
PKKQQALSRAKKGKLPPKRVSKNVSKVSKVSKVLPTKAMPEPSSVDAAADNGAVSETPSV
ITLDNKETSESVAQSDTVFDSFWLDVIAPEPSGDETNLDVEDSVSDKTPTPEASRTVPCP
NIPASTSVSLGDQASEGNTERQIQDSDEFAKADEKDVQSDECTATSAISAEINQDSCIGL
DPGLGESSSSVNPWDEEEVPLMVADSQVLYMPYKENVSSYDEGEASSSSFVTGDHQEPEN
NDFVGLGGLFDEPEVTEGPVCGPPCKPEASGAVGFTAFSSESDPEEIDDSDSPVSVERCL
AHFTKPEILSDDNAWNCENCSKNLKLQRLREKRKSSNTSNGWVSENEDGVLGETDVKQDP
SDSGREAMSSNDSESEGEEDSEKVITVKRDATKRVLLNKVPPVLTIHLKRFSQDLRGRLS
KLNGHVAFKEVIDLRHYMDPRCSGEDPPVYRLAGLVEHSGTMRGGHYVAYVRGGGGKKVK
ESDSSSSSSVWYNVSDAHVRQVSLDKVLHSEAYILFYERIV
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaagctaagaagaaagctcaaactaaggagaatctgaatcagaccaagaat
ctctccgaacagcctagtgaagtagctgaggaggcagttaaggagaagcaagcttgtgtg
catttcgataaaggtctaaatttagacaaagtcttggacaagattaagtcttctcaggtg
atcaagtgtcatgaatgcaaggaaggggcgaaagcaaagggtagtaataaggggaaacat
aaagctatttgggtttgtttggaatgtggctgttatgtctgtggaggtgttggcttgcca
actttaccgcagagtcatgttctcaaacacatcagatcgacacgtcaccgtttggtgatt
caatgggagaatcctcagttacgatggtgtttcccctgcaactcgcttctccctaacggt
gagaagaaagatgcgttgttggaggttgttaaactgatgaaagaacggtctttaaacagt
ttagctccttcttcatctgatgatgccgaaggaagtgggagtatgagtatcactagtgac
attgtaaccattggtgtagaagcaagagatggttatgttgtgagaggtttagttaacctt
gggaacacgtgtttctttaactctataatgcagaatcttctctctttggatcagttacga
tgccacttcttgaaggaggatgtgtctggtgttggtctgcctcttgcttcttctttaagg
aaactattcgctgagatgaagccagaggcgggtttaaagagtgtgatcaatcctagagcc
tttttcgcgactttctgcgctaaggcgccgcagtttaggggatatgaccagcatgatagc
cacgagctgctgcgatgtttgctggattcgttgagcacggaagaatctgcctggaggaag
aggcgtggtggtgtttgtgatgatgatgagaaggctactactactactactactcttgtg
gattctgtgtttggaggcgagacttcgagcattgtttcttgtattgagtgtgggcattcc
tcgaaaatctatgagccgtttttggatctctctttgcctgtgccgtttaagaaaactcct
cctaagaagcagcaagccctttcccgagcaaagaaaggtaagcttccaccgaagagagtc
tctaagaatgtgtcaaaggtgagtaaagtttcaaaagtcctcccaactaaggctatgccg
gaaccgagctctgttgatgccgcagctgacaatggtgcggtttcagagactccttcggtt
ataactcttgacaataaggagacatcagagagtgtagctcaaagtgatactgtttttgat
agcttctggttggacgttattgcgccagaaccctctggagatgagacaaatcttgatgtg
gaagatagcgttagtgataaaaccccaacacctgaggctagtcgaactgttccatgtcca
aacattcctgccagtacttcggtttcattgggtgatcaggcttcagaaggtaacacagag
agacagatacaagatagtgacgagtttgcaaaggcagatgaaaaagatgtacagtctgat
gaatgcacagctacaagcgctatttctgctgagatcaatcaagatagttgcattggtttg
gatcctggtttaggggaaagttcttcctcggtgaatccttgggatgaggaagaggttccg
ttgatggttgcagattcgcaagtcctctacatgccatacaaagaaaacgtatcttcctat
gatgagggtgaggcttcttcatcttcatttgttactggtgatcatcaagaaccagaaaac
aatgattttgtcggtttaggcggtttattcgatgagcctgaggttaccgaagggcctgtt
tgtggacctccttgtaagcctgaagcctctggagctgttggttttacggcgttcagcagc
gagtctgatcctgaagaaatcgatgattcggattcaccagtgtctgtagagaggtgttta
gctcatttcactaagccagagattttgtctgacgacaatgcttggaactgcgagaactgt
tcaaagaacctcaaactccaacggttgagagaaaagagaaaatcaagcaacaccagcaac
gggtgggtgagtgaaaatgaagatggagttttgggagaaaccgatgtgaagcaagatcca
agtgatagtggaagagaagctatgagttctaatgacagtgaatccgaaggcgaagaagat
tcggagaaagtgataacagtgaaaagagatgcaacgaaaagagtacttctaaacaaagtt
ccacctgtcttaaccattcatctaaagcgattcagccaagacctgcgtggtaggctaagt
aagttaaatggtcatgttgctttcaaagaagtcatcgatcttcgacactatatggaccca
aggtgtagtggagaagacccgccggtttatagattagctggattggtggagcattcaggg
acaatgagaggaggtcactatgtggcgtatgttagaggaggaggaggtaagaaagttaaa
gagagtgactcctcctcctcctcaagtgtgtggtataacgtaagcgatgcacatgtccgt
caggtttcgttggacaaggttctgcattcagaagcgtacatcttgttctacgaacggatc
gtctga
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